Metagenome-assembled genome: SRR873599_bin.25_meta... - BioSample

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Metagenome-assembled genome: SRR873599_bin.25_metaWRAP_v1.3_MAG

Identifiers: BioSample: SAMEA110744917; SRA: ERS12842442

Organism: uncultured Bacillales bacterium
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; environmental samples

Attributes

broad-scale environmental context	Sheep digestive system
collection date	not provided
environmental medium	Rumen content
geographic location	New Zealand
investigation type	metagenome-assembled genome
isolation source	sheep gut metagenome
project name	Rumen metagenome and metatranscriptome sequencing from low and high methane producing sheep.
sample name	SRR873599_bin.25_metaWRAP_v1.3_MAG
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2022-08-25
ENA-LAST-UPDATE	2022-08-25
External Id	SAMEA110744917
INSDC center alias	EMG
INSDC center name	EMG
INSDC first public	2022-08-25T16:15:44Z
INSDC last update	2022-08-25T16:15:44Z
INSDC status	public
Submitter Id	SRR873599_bin.25_metaWRAP_v1.3_MAG
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes v3.15.3
binning parameters	MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.
binning software	metaWRAP v1.3
broker name	EMG broker account, EMBL-EBI
completeness score	80.56
completeness software	CheckM
contamination score	0.0
geographic location (latitude)	not provided
geographic location (longitude)	not provided
local environmental context	Rumen
metagenomic source	sheep gut metagenome
sample derived from	SAMN02144230
sequencing method	Illumina HiSeq 2000
taxonomic classification	The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__;s__
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR873599 of study SRP022254.