bin.493 MAG

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Result Filters

Organism: Puniceicoccaceae bacterium MED-G32
cellular organisms; Bacteria; PVC group; Verrucomicrobiota; Opitutia; Puniceicoccales; Puniceicoccaceae; unclassified Puniceicoccaceae

Attributes

broad-scale environmental context	ENVO_01000023
collection date	2011-07-10
environmental medium	ENVO_00002006
geographic location	Atlantic Ocean
isolation source	North Atlantic
project name	GEN_BGC Atlantic-Pacific 2011
sample name	bin.493 MAG
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2023-03-06
ENA-LAST-UPDATE	2023-03-06
External Id	SAMEA112746717
INSDC center alias	IDAEA-CSIC
INSDC center name	IDAEA-CSIC
INSDC first public	2023-03-06T12:25:11Z
INSDC last update	2023-03-06T12:25:11Z
INSDC status	public
Submitter Id	bin.493 MAG
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	MEGAHIT
binning parameters	default
binning software	MetaBAT2
completeness score	97.97
completeness software	CheckM
contamination score	0
geographic location (latitude)	32.084
geographic location (longitude)	-17.286
local environmental context	ENVO_01000035
metagenomic source	marine metagenome
sample derived from	ERS14678684,ERS14678685,ERS14678686,ERS14678687,ERS14678688,ERS14678689,ERS14678690,ERS14678691,ERS14678692,ERS14678693,ERS14678694,ERS14678695
scientific_name	Puniceicoccaceae bacterium MED-G32
taxonomic identity marker	GTDB-Tk bac120

BioProject: PRJEB60184 Responses to organic pollutants in the tropical Pacific and subtropical Atlantic oceans by pelagic marine bacteria
Retrieve all samples from this project

bin.493 MAG
bin.493 MAG

biosample
BioSample links for Nucleotide (Select 2468036003) (1)
BioSample
PubChem Substance Links for Gene (Select 79986) (66)
PubChem Substance
MAG: Puniceicoccaceae bacterium MED-G32 isolate bin.493 MAG genome assembly, con...
MAG: Puniceicoccaceae bacterium MED-G32 isolate bin.493 MAG genome assembly, contig: k119_2834050, whole genome shotgun sequence
gi|2468035831|emb|CATHUQ010000015.1 |WGS:CATHUQ01|k119_2834050

Nucleotide
MAG: Puniceicoccaceae bacterium MED-G32 isolate bin.493 MAG genome assembly, con...
MAG: Puniceicoccaceae bacterium MED-G32 isolate bin.493 MAG genome assembly, contig: k119_2839820, whole genome shotgun sequence
gi|2468035827|emb|CATHUQ010000016.1 |WGS:CATHUQ01|k119_2839820

Nucleotide