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Microbe sample from Pseudoalteromonas sp.

Identifiers
BioSample: SAMN09638514; Sample name: Uncultivated Pseudoalteromonas sp. HyVt-327 genome recovered from SRR1555743 and SRR1555748; SRA: SRS3740093
Organism
Pseudoalteromonas sp.
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas; unclassified Pseudoalteromonas
Package
Microbe; version 1.0
Attributes
isolateHyVt-327
isolation sourceLoki non-amplified sample from Loki's castle hydrothermal vent sediment
collection date2010
geographic locationArctic Ocean: Gakkel Ridge
sample typemetagenomic assembly
latitude and longitude73.763167 N 8.464000 E
subsource noteMetagenome-assembled genome binned from sequencing reads available in SRR1555743 and SRR1555748
metagenome sourcemarine sediment metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated98.4
contamination_estimated1.23
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage4.03
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA480137 metagenomes
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-07-11
Accession:
SAMN09638514
ID:
9638514

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