U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

Animal sample from Poecile atricapillus (Black-capped chickadee) for VGP reference genome, bPoeAtr1

Identifiers
BioSample: SAMN35074507; Sample name: Animal sample from Poecile atricapillus (Black-capped chickadee) for VGP reference genome, bPoeAtr1
Organism
Poecile atricapillus (Black-capped chickadee)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Poecile
Package
Model organism or animal; version 1.0
Attributes
isolatebPoeAtr1
development stageadult
sexfemale
tissueblood
biomaterial providerRockefeller University
collected byJean-Nicolas Audet
collection date2018-05-18
death dateMay 18, 2018
geographic locationUSA: Rockefeller University Field Research Center, Millbrook, New York
latitude and longitude41.767983 N 73.750862 W
storage conditions-80oC
treatment100% EtOH frozen
Animal IDbPoeAtr1.BL1
Description

The black-capped chickadee (Poecile atricapillus) is a small North American songbird that lives in deciduous and mixed forests. It is a passerine bird in the tit family, the Paridae (from Wikipedia). The species name is derived from its chick-a-dee-dee-dee call. This sample was collected from an adult female in the wild at the Rockefeller University Field Research Center, by Jean-Nicolas Audet and Melanie Couture, for a song and cognitive genetics study, and used to create at high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis, with funding support from HHMI.

BioProjects
PRJNA1004590 Poecile atricapillus isolate:bPoeAtr1
Retrieve all samples from this project

PRJNA972430 Poecile atricapillus isolate:bPoeAtr1
Retrieve all samples from this project

PRJNA972429 Poecile atricapillus isolate:bPoeAtr1
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2023-05-14
Accession:
SAMN35074507
ID:
35074507

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center