This sample represents a MAG derived from the meta... - BioSample

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Attributes

broad-scale environmental context	hominid body
collection date	2013
environmental medium	feces
geographic location	Republic of the Congo
investigation type	metagenome-assembled genome
isolation source	Feces of Gorilla gorilla gorilla (CG)
sample name	H07603-L1_cleanbin_000048
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2023-11-07T00:47:01Z
ENA-LAST-UPDATE	2023-11-07T00:47:01Z
External Id	SAMEA114585596
INSDC center name	ICMB
INSDC first public	2023-11-07T00:47:01Z
INSDC last update	2023-11-07T00:47:01Z
INSDC status	public
Submitter Id	H07603-L1_cleanbin_000048
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	spades
binning parameters	refined binning from maxbin2 metabat2 vamb and concoct
binning software	MAGSCoT
completeness score	66.66666667
completeness software	MAGSCoT
contamination score	9.166666667
contamination software	MAGSCoT
geographic location (latitude)	not collected
geographic location (longitude)	not collected
local environmental context	hominid gut
metagenomic source	Gorilla gorilla gut
sample derived from	SAMN11515237
scientific_name	bacterium
taxonomic classification	gtdtbk
taxonomic identity marker	gtdtbtk marker gene sets