Metagenome-assembled genome: ERR7163074_maxbin2_7

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Result Filters

Organism: uncultured Psychrosphaera sp.
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Psychrosphaera; environmental samples

Attributes

broad-scale environmental context	aquatic
collection date	2017-11-16
environmental medium	aquaculture
geographic location	South Korea
investigation type	metagenome-assembled genome
isolation source	aquaculture metagenome
project name	Illumina HiSeq 4000 paired end sequencing
sample name	ERR7163074_maxbin2_7
ENA first public	2024-04-04
ENA-CHECKLIST	ERC000047
External Id	SAMEA115172077
INSDC center name	EMG
INSDC last update	2024-02-01T16:07:08Z
INSDC status	public
Submitter Id	ERR7163074_maxbin2_7
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaspades_v3.15.3
binning parameters	default
binning software	MGnify-genomes-generation-pipeline_v1.0.0
broker name	EBI-EMG
completeness score	99.35
completeness software	CheckM2_v1.0.1
contamination score	1.58
geographic location (latitude)	34.31808333
geographic location (longitude)	126.6691944
local environmental context	marine
metagenomic source	aquaculture metagenome
sample derived from	SAMEA10031325
scientific_name	uncultured Psychrosphaera sp.
sequencing method	Illumina HiSeq 4000
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR7163074 of study ERP132647.