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MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA41538

Identifiers
BioSample: SAMN00792782; Sample name: SPAR72
Organism
Streptococcus pneumoniae GA41538
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae
Package
MIGS: cultured bacteria/archaea, human-associated; version 6.0
Attributes
investigation typebacteria_archaea
strainGA41538
broad-scale environmental contextterrestrial biome [ENVO:00000446]
collection date2004-04-30
local-scale environmental contexthuman-associated habitat [ENVO:00009003]
geographic locationUSA: Georgia
latitude and longitudenot determined
environmental mediumblood [ENVO:02000020]
project namePneumococcal Multidrug Resistance And Vaccine Escape
isolation and growth conditionnot determined
number of repliconsnot determined
reference for biomaterialnot determined
hostHomo sapiens
host taxonomy ID9606 (9606)
sample size12 mL
serotype06B
source material identifiersGeorgia Emerging Infections Program
host diseasepneumonia
host tissue samplednot determined
host body productblood
finishing strategy (depth of coverage)18.07x
sequencing method454
assemblyCelera Assembler, Version 6.1
nucleic acid extractionGenomic Tip
Description

Keywords: GSC:MIxS;MIGS:6.0

Links
GSCID Pneumococcal Multidrug Resistance And Vaccine Escape
BioProject
PRJNA48785 Streptococcus pneumoniae GA41538
Retrieve all samples from this project

Submission
University of Maryland School of Medicine, Institute for Genome Sciences, Lynn Schriml; 2012-02-27
Accession:
SAMN00792782
ID:
792782

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