Sample from Mannheimia varigena USDA-ARS-USMARC-13... - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Links from Nucleotide

Sample from Mannheimia varigena USDA-ARS-USMARC-1312

Identifiers: BioSample: SAMN03081507; GenBank: gb|CP006944.1

Organism: Mannheimia varigena USDA-ARS-USMARC-1312
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia varigena

Attributes

geographic location	Canada: Saskatchewan
collection date	2003
strain	USDA-ARS-USMARC-1312
broad-scale environmental context	terrestrial biome
environmental package	Not available
estimated size	2500000
local-scale environmental context	livestock-associated habitat
geographic location	Canada: Saskatchewan
health state	dead
investigation type	bacteria_archaea
isolation and growth condition	Not collected
latitude and longitude	Not collected
environmental medium	mucus
number of replicons	1
pathogenicity	animal
ploidy	haploid
project name	USMARC Bovine Respiratory Disease Pathogen Sequencing Project
reference for biomaterial	Not available
host	Bos taurus
annot_source	DIYA
finishing_strategy	complete: 11X coverage: reads >= 11000
seq_meth	PacBio C2 P4
assembly	Celera 7.0 : Consensus accuracy of 99.993% : Quiver

BioProject: PRJNA230707 Mannheimia varigena USDA-ARS-USMARC-1312
Retrieve all samples from this project

Submission: USDA-ARS-U.S. Meat Animal Research Center, Genetics, Breeding, and Animal Health Research Unit; 2014-09-26

Accession:: SAMN03081507
ID:: 3081507

BioProject Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
Nucleotide
Nucleotide links
Assembly
Assembly
Taxonomy
Links to Taxonomy

Recent activity

Clear Turn Off Turn On

Sample from Mannheimia varigena USDA-ARS-USMARC-1312
Sample from Mannheimia varigena USDA-ARS-USMARC-1312

biosample
BioSample links for Nucleotide (Select 575444473) (1)
BioSample
Vibrio cholerae isolate ena-yuan-VIB_BA2170AA_AS, whole genome shotgun sequencin...
Vibrio cholerae isolate ena-yuan-VIB_BA2170AA_AS, whole genome shotgun sequencing project
gi|2691133645|emb|CAWSLV000000000.1 LV010000000

Nucleotide
Ppm1 [Drosophila melanogaster]
Ppm1 [Drosophila melanogaster]
gi|19922996|ref|NP_612039.1|

Protein

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample