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Pathogen: clinical or host-associated sample from Elizabethkingia miricola

Identifiers
BioSample: SAMN03998138; Sample name: EM_CHUV
Organism
Elizabethkingia miricola
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Elizabethkingia
Package
Pathogen: clinical or host-associated; version 1.0
Attributes
strainEM_CHUV
collected byBacteriology lab of CHUV
collection date2014-12-15
geographic locationSwitzerland
hostHomo sapiens
host diseasePneumonia
isolation sourceEndotracheal secretions
latitude and longitude46.95 N 7.47 E
Description

we describe here the whole genome sequence and analysis of a clinical isolate of Elizabethkingia miricola associated to patient death after a septic choc from a respiratory tract origin. Furthermore, a genome comparison is performed to investigate his relationship with the other species of the same Genus.

BioProject
PRJNA293155 Elizabethkingia miricola strain:EM_CHUV
Retrieve all samples from this project

Submission
Genomic Research Laboratory, GRL; Geneva University Hospital, HUG, Seydina Diene; 2015-08-18
Accession:
SAMN03998138
ID:
3998138

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