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Draft genome of Arthrobacter antarcticus W2

Identifiers
BioSample: SAMEA3490269; SRA: ERS797418
Organism
Paeniglutamicibacter antarcticus
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales; Micrococcaceae; Paeniglutamicibacter
Attributes
collected byMette Burmolle
isolateArthrobacter antarcticus
isolation sourceWall Segment in a Danish Slaughterhouse
sample name11
strainW2
ENA first public2016-02-01
ENA last update2015-10-13
ENA-CHECKLISTERC000011
External IdSAMEA3490269
INSDC center aliasUniversitetsparken 15
INSDC center nameUniversitetsparken 15
INSDC first public2016-02-01T17:01:35Z
INSDC last update2015-10-13T18:24:28Z
INSDC statuspublic
Submitter Id11
Description

Here we present a draft genome of Arthrobacter antarcticus W2. The strain was isolated from a wall in small Danish Slaughterhouse. We have in a recent publication shown how this strain can be involved in synergistic biofilm formation with other bacterial species isolated from the same environment. Genome sequencing libraries were prepared using the Nextera XT kit (Illumina, USA), according to the manufacturer’s recommendations, followed by sequencing as a part of the flowcell, as 2 × 250-base paired-end reads using the Illumina MiSeq (Illumina, USA) technology. The reads were cleaned and trimmed using CLC Genomics Workbench 7 (CLC bio, Denmark). Cleaned reads were assembled using SPAdes v 3.5.0. Obtained contigs were analyzed by VecScreen, to ensure no primer, phage or transposase contamination occurred in the contigs. Contigs smaller than 500bp were discarded.

BioProject
PRJEB9950 Draft genome of Arthrobacter antarcticus W2
Retrieve all samples from this project

Submission
EBI; 2016-02-02
Accession:
SAMEA3490269
ID:
4452159

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