Uncultivated Methylophaga sp. UBA3196 genome recov... - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Links from SRA

Uncultivated Methylophaga sp. UBA3196 genome recovered from ERX556314

Identifiers: BioSample: SAMN06451767; Sample name: Methylophaga sp. UBA3196; SRA: SRS2031665

Organism: Methylophaga sp. UBA3196
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga; unclassified Methylophaga

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	missing
isolate	UBA3196
isolation source	saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome source	marine metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in ERX556314 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	75.00%
contamination_estimated	4.31%
environmental_sample	true
genome_coverage	53.52
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599352.

Description: Uncultivated genome recovered from an assembly of the ERX556314 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06451767
ID:: 6451767

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly

Recent activity

Clear Turn Off Turn On

Uncultivated Methylophaga sp. UBA3196 genome recovered from ERX556314
Uncultivated Methylophaga sp. UBA3196 genome recovered from ERX556314

biosample
BioSample Links for SRA (Select 3797854) (1)
BioSample
Gene Links for GEO Profiles (Select 125872878) (5)
Gene
Taxonomy Links for SRA (Select 3797854) (1)
Taxonomy
0747-9395[ISSN] (1)
NLM Catalog

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample