U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from SRA

Uncultivated Rickettsiales bacterium UBA4270 genome recovered from SRX290706

Identifiers
BioSample: SAMN06452398; Sample name: Rickettsiales bacterium UBA4270; SRA: SRS2032793
Organism
Rickettsiales bacterium UBA4270
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rickettsiales; unclassified Rickettsiales
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA4270
isolation sourcelow methane producing sheep
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX290706 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated64.09%
contamination_estimated0.71%
environmental_sampletrue
genome_coverage31.85
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873596.
Description

Uncultivated genome recovered from an assembly of the SRX290706 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452398
ID:
6452398

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center