U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from SRA

Uncultivated Porphyromonadaceae bacterium UBA7289 genome recovered from SRX331752

Identifiers
BioSample: SAMN06454575; Sample name: Porphyromonadaceae bacterium UBA7289; SRA: SRS2033661
Organism
Porphyromonadaceae bacterium UBA7289
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Wyoming
isolateUBA7289
isolation sourceRumen fluid
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX331752 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated72.64%
contamination_estimated0.63%
environmental_sampletrue
genome_coverage18.39
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR948136.
Description

Uncultivated genome recovered from an assembly of the SRX331752 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454575
ID:
6454575

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center