MIGS Cultured Bacterial/Archaeal sample from Paste... - BioSample

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN00761813; Sample name: HMPREF1052; SRA: SRS281652

Organism: Pasteurella bettyae CCUG 2042
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurella; Pasteurella bettyae

Attributes

collection date	not determined
estimated size	2258000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
investigation type	missing
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
project name	Pasteurella bettyae CCUG 2042
geographic location	not determined
source material identifiers	CCUG 2042
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
strain	CCUG 2042
environmental package	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft64.5x;73
project_type	Reference Genome
misc_param: HMP body site	Vaginal
nucleic acid extraction	not determined
assembly	Newbler v. 2.6
misc_param: HMP supersite	urogenital_tract
sequencing method	Illumina HiSeq 2000
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf