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Microbe sample from Methylococcaceae bacterium

Identifiers
BioSample: SAMN10967358; Sample name: Uncultivated Methylococcaceae bacterium UWMA-0005 genome recovered from SRR1217460 SRR1217463 SRR1217565; SRA: SRS4405004
Organism
Methylococcaceae bacterium
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Methylococcales; Methylococcaceae; unclassified Methylococcaceae
Package
Microbe; version 1.0
Attributes
isolateUWMA-0005
isolation sourceAbe hydrothermal plume 200m
collection date2009-05-25
geographic locationPacific Ocean:Lau Basin
sample typemetagenomic assembly
latitude and longitude20.76121471 S 176.19057363 W
derived fromMetagenome-assembled genome binned from sequencing reads available in SRR1217460 SRR1217463 SRR1217565
metagenome sourcemarine metagenome
assembly_method_and_versionSPAdes v3.12.0
completeness_estimated97.87
contamination_estimated1.96
quality_assessment_method_and_versionCheckM v1.0.11
environmental-sampletrue
genome_coverage17.56
mapping_method_and_versionBowtie 2 v2.3.4.1
metagenomictrue
BioProject
PRJNA522654 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
University of Wisconsin-Madison, Zhichao Zhou; 2019-02-19
Accession:
SAMN10967358
ID:
10967358

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