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Microbe sample from Methylococcaceae bacterium

Identifiers
BioSample: SAMN10967455; Sample name: Uncultivated Methylococcaceae bacterium UWMA-0107 genome recovered from SRR1217461 SRR1217465; SRA: SRS4404898
Organism
Methylococcaceae bacterium
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Methylococcales; Methylococcaceae; unclassified Methylococcaceae
Package
Microbe; version 1.0
Attributes
isolateUWMA-0107
isolation sourceTahi Moana Above plume background
collection date2009-06-29
geographic locationPacific Ocean:Lau Basin
sample typemetagenomic assembly
latitude and longitude20.68213071 S 176.18336343 W
derived fromMetagenome-assembled genome binned from sequencing reads available in SRR1217461 SRR1217465
metagenome sourcemarine metagenome
assembly_method_and_versionSPAdes v3.12.0
completeness_estimated95.2
contamination_estimated1.84
quality_assessment_method_and_versionCheckM v1.0.11
environmental-sampletrue
genome_coverage10.92
mapping_method_and_versionBowtie 2 v2.3.4.1
metagenomictrue
BioProject
PRJNA522654 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
University of Wisconsin-Madison, Zhichao Zhou; 2019-02-19
Accession:
SAMN10967455
ID:
10967455

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