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Microbe sample from Methylococcaceae bacterium

Identifiers
BioSample: SAMN10967681; Sample name: Uncultivated Methylococcaceae bacterium UWMA-0348 genome recovered from SRR3577362; SRA: SRS4404886
Organism
Methylococcaceae bacterium
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Methylococcales; Methylococcaceae; unclassified Methylococcaceae
Package
Microbe; version 1.0
Attributes
isolateUWMA-0348
isolation sourceGuaymas Basin Hydrothermal plume metagenome
collection date2004-07-11
geographic locationUSA:Guaymas Basin
sample typemetagenomic assembly
latitude and longitude27.51583333 N 111.425 W
derived fromMetagenome-assembled genome binned from sequencing reads available in SRR3577362
metagenome sourcemarine metagenome
assembly_method_and_versionSPAdes v3.12.0
completeness_estimated91.36
contamination_estimated1.92
quality_assessment_method_and_versionCheckM v1.0.11
environmental-sampletrue
genome_coverage3.75
mapping_method_and_versionBowtie 2 v2.3.4.1
metagenomictrue
BioProject
PRJNA522654 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
University of Wisconsin-Madison, Zhichao Zhou; 2019-02-19
Accession:
SAMN10967681
ID:
10967681

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