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Uncultivated Methylophaga sp. UBA3369 genome recovered from ERX552309

Identifiers
BioSample: SAMN06451633; Sample name: Methylophaga sp. UBA3369; SRA: SRS2030927
Organism
Methylophaga sp. UBA3369
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga; unclassified Methylophaga
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA3369
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX552309 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated83.82%
contamination_estimated1.65%
environmental_sampletrue
genome_coverage8.76
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594414.
Description

Uncultivated genome recovered from an assembly of the ERX552309 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451633
ID:
6451633

BioProject SRA Nucleotide

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