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Uncultivated Oceanicaulis sp. UBA6590 genome recovered from ERX552271

Identifiers
BioSample: SAMN06451397; Sample name: Oceanicaulis sp. UBA6590; SRA: SRS2030767
Organism
Oceanicaulis sp. UBA6590
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Maricaulales; Maricaulaceae; Oceanicaulis; unclassified Oceanicaulis
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA6590
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX552271 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.85%
contamination_estimated0.43%
environmental_sampletrue
genome_coverage22.92
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594289.
Description

Uncultivated genome recovered from an assembly of the ERX552271 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451397
ID:
6451397

BioProject SRA Nucleotide

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