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Uncultivated Dehalococcoidia bacterium UBA1122 genome recovered from ERX556139

Identifiers
BioSample: SAMN06451859; Sample name: Dehalococcoidia bacterium UBA1122; SRA: SRS2031603
Organism
Dehalococcoidia bacterium UBA1122
cellular organisms; Bacteria; Terrabacteria group; Chloroflexota; Dehalococcoidia; unclassified Dehalococcoidia
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA1122
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX556139 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated81.02%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage25.57
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599008.
Description

Uncultivated genome recovered from an assembly of the ERX556139 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451859
ID:
6451859

BioProject SRA Nucleotide

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