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BioSample

National Center for Biotechnology Information

Organism: [Lactobacillus] timonensis
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Limosilactobacillus

Attributes

collection date	2020-01-25
geographic location	USA: Madison, WI
latitude and longitude	43.073051 N 89.401230 W
isolation source	anaerobic bioreactor effluent; solid retention time of 6 days
isolate	UW_DM_LIMLAC3_3
broad-scale environmental context	bioreactor [ENVO:00002123]
local-scale environmental context	anaerobic bioreactor [ENVO:00002124]
environmental medium	biological waste material [ENVO:01000373]
dissolved oxygen	0 micromole per kilogram
pH	5.5
reference for biomaterial	3300045589_9
relationship to oxygen	anaerobe
sample collection device or method	Syringe
sample material processing	Biomass centrifuged 10 min 10,000xrcf, aliquot frozen for DNA extraction
sample size	2 milliliter
sample storage location	Freezer
sample storage temperature	-80 degree Celcius
source material identifiers	DMB5_7SRT_A
temperature	35 degree Celcius
sample type	metagenomic assembly
metagenome source	bioreactor sludge metagenome
derived from	SAMN22064474
experimental factor	solid retention time of 6 days
metagenomic	1
environmental-sample	1