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BioSample

National Center for Biotechnology Information

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290 Metagenome-assembled Genomes from the Mediterranean Sea

Identifiers: BioSample: SAMN06972041; Sample name: Synechococcus sp. TMED187

Organism: Synechococcus sp. TMED187
cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae; Synechococcus; unclassified Synechococcus

Package: Microbe; version 1.0

Attributes

host	not applicable
strain	not applicable
metagenome source	marine metagenome
sample type	metagenomic assembly
collection date	2009
collected by	Tara Oceans Consortium
depth	5-72m
broad-scale environmental context	marine photic zone
geographic location	Mediterranean Sea
isolate	TMED187
isolation source	seawater
metagenomic	TRUE
environmental-sample	TRUE
note	This BioSample is a metagenomic assembly obtained from the publically available reads for the TARA Oceans Project deposited in the Sequence Read Archive (SRA) database with accessions ERS488346, ERS488330, ERS477998, ERS477979, ERS488509, ERS488486, ERS478040, ERS477953, ERS477931, ERS488147, ERS488119, and ERS478017.

BioProject: PRJNA385857 marine plankton metagenome
Retrieve all samples from this project

Submission: University of Southern California, Benjamin Tully; 2017-05-12

Accession:: SAMN06972041
ID:: 6972041

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txid1986595[Organism] (1)
BioSample
290 Metagenome-assembled Genomes from the Mediterranean Sea
290 Metagenome-assembled Genomes from the Mediterranean Sea

biosample
Acanthaster planci DNA, contig: oki_scaffold_1535, whole genome shotgun sequence
Acanthaster planci DNA, contig: oki_scaffold_1535, whole genome shotgun sequence
gi|1119124916|dbj|BDGF01001535.1|

Nucleotide
cytochrome oxidase subunit 1, partial (mitochondrion) [Porphyra purpurea]
cytochrome oxidase subunit 1, partial (mitochondrion) [Porphyra purpurea]
gi|343887792|gb|AEM65388.1|

Protein
Acanthaster planci DNA, contig: oki_scaffold_1529, whole genome shotgun sequence
Acanthaster planci DNA, contig: oki_scaffold_1529, whole genome shotgun sequence
gi|1119124922|dbj|BDGF01001529.1|

Nucleotide

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