MIGS Cultured Bacterial/Archaeal sample from Strep... - BioSample

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Result Filters

Organism: Streptococcus sanguinis SK355
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sanguinis

Attributes

collection date	not determined
estimated size	2369000
host	Homo sapiens
source material identifiers	CCUG 59325
local-scale environmental context	Homo sapiens-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
project name	Streptococcus sanguinis SK355
geographic location	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
latitude and longitude	not determined
isolation and growth condition	not determined
environmental package	missing
strain	CCUG 59325
number of replicons	not determined
finishing strategy (depth of coverage)	Level 2: High-Quality Draft30.79x;37
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
project_type	Reference Genome
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
assembly	Newbler v2.3-04192010
misc_param: HMP supersite	oral
sequencing method	454-Paired-end

Description

Streptococcus sanguinis CCUG 59325

Keywords: GSC:MIxS;MIGS:6.0

BioProject: PRJNA53173 Streptococcus sanguinis SK355
Retrieve all samples from this project

MIGS Cultured Bacterial/Archaeal sample from Streptococcus sanguinis SK355
MIGS Cultured Bacterial/Archaeal sample from Streptococcus sanguinis SK355

biosample
txid888816[Organism] (1)
BioSample
Homo sapiens mirror-image polydactyly 1 (MIPOL1), transcript variant 2, mRNA
Homo sapiens mirror-image polydactyly 1 (MIPOL1), transcript variant 2, mRNA
gi|305682557|ref|NM_001195297.1|

Nucleotide
RecName: Full=AA9 family lytic polysaccharide monooxygenase C; Short=LPMO9C; Alt...
RecName: Full=AA9 family lytic polysaccharide monooxygenase C; Short=LPMO9C; AltName: Full=Cellulase LPMO9C; AltName: Full=Endo-beta-1,4-glucanase LPMO9C; Short=Endoglucanase LPMO9C; AltName: Full=Glycosyl hydrolase 61 family protein LPMO9C; Flags: Precursor
gi|2706656510|sp|A0A0J9XK58.1|LP9C_

Protein
hypothetical protein DV495_004501 [Geotrichum candidum]
hypothetical protein DV495_004501 [Geotrichum candidum]
gi|1851233226|gb|KAF5120630.1||gnl| QZO|g4495.t1.cds

Protein