Conserved Protein Domain Family
PRK08563

?
PRK08563: PRK08563 
DNA-directed RNA polymerase subunit E'; Provisional
Statistics
?
PSSM-Id: 236289
Aligned: 88 rows
Threshold Bit Score: 205.059
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
289596245   4 IVEQEDVIRIPPPMLAEDIDQVIEELAREKIEGSVysfprnevkdpAERKYIIVLILSLEKVDEGIIVPGDGAVYQKVRF 83 
218884656   4 LIRVNDVIRIPPAKFGRPVKDVALEELRSKYEGTIasie---skggEHKLGIIVTIIDVKVDENGRILPGDGATYHDVEM 80 
126460593   5 LVEAEDYVRIPPSEFGKPLEDIALAQLKARYENRV-----------VREVGYVVAVLSVKVKREGKIIFGDGGTYHKARF 73 
18314155    5 LVEAEDYVRVPPTEFGKPLEDIALSQLKSRYEGKV-----------LREVGYIVAVLNVKVGREGKIVFGDGGTYHRAVF 73 
126465733   5 LYRIRDVVRIPPEKFNKPLEEAAWEELRQSYEGMI-----------TKNLGIIVTVLDVKVDPQGKVIPGDGATYHKAEF 73 
297527594   5 LYRIRDVVRIPPEKFSKPLEEAAWEELRQTYEGMI-----------TKNLGIIVTVLDVNVDPQGKIIPGDGATYHKAEF 73 
124027330   4 IYRVRDVVRIPPSLFGMSLEEAALKVLTEKYVGYV-----------HPEMGVIVAIFDVKVSEEGRVIPGDGATYHDSEY 72 
296243100   4 VIKVRDVVRIPPSKFGRPLEEVALEELREQYEGSVvilknpftseeKKEPSIIVTILGLSIEPSGKIIPGDGATYHNVEF 83 
159041701  20 VITVEDYIRVPPSVFNEPIDKIAYEQLRSNYEGKV-----------DRELGVFIAVFDVKVDKRGVIVYGDGATYHKVSF 88 
305662653   4 VYKLRDVVRIDPSKLDREIEEVAFEELRKRYEGLK-----------DRNLGIVLAITNIKVDPIGYIPMGDGAPYHRVEF 72 
289596245  84 KALAFHPELQEVVVGDVVDVLKFGAFIRFGPIDGLLHISQI-MDDVIDIDLDNKRFIGRETK-RSLRVKDKVMARVVALS 161
218884656  81 SALVFSPFIKEVVEGEAVTVAKSGIYLNLGVLDGFIHINQV-SEEKVSYDNTRSAIMLEESH-RTIEKGDILRAKIYTIG 158
126460593  74 TLLAFVPLDGEVVEGVVENVREVGMLVRIGPIVGFINKIHVmDEPNIFFDASTKSYIGERTR-RRVSVGDIVRARITGVS 152
18314155   74 TMLAFMPLDGEVVEGVVENAREMGMLVRIGPILGFINKIHImDDPNIFFDASTKSYIGERTK-RRVSVGDVVRARITGVS 152
126465733  74 TVLAFYPFIKEVVEGRINTVLAHGAFVDLGASDGFIYINQI-SDEKIDYDPTRPALILRESR-RMLERGDAVRARVYNVA 151
297527594  74 TVLAFYPFIKEVVEGRINTVLAHGAFVDLGASDGFIYINQI-SDEKIDYDPTRPALILRESR-RMLERGDAVRARVYNVA 151
124027330  73 SVLAFKPIVKEVVEGVVVSIQQSFARISLGPVEGIAHISQV-MDEHVIFDPQRRAFIGERTR-RIVEVGDIVRTRVISVS 150
296243100  84 EALVFHPFLKEVVEGDVVTVTKNGLYVDLGVLDGFIYINQV-ADEKVTYDPGRGALFLEESK-KYVDKGDVVRARIFNIS 161
159041701  89 KALVFVPLINEIVEGDVVDVKEYGAHVRIGALTAFIHRSQVmDENVVLFDRQSGVFMGEKNRqKKVGRGDVVRARIVGVS 168
305662653  73 DVLTYVPIVGEIVEGIVETIGRMGITIRIGPIEGFVHISQI-SDDEVRYDPVSNTLICKNTK-RVISQGDIVRARITTVS 150
289596245 162 INDANPRQS---KIGLTMRQPGLGKFEWIEEMVKGEKEGK 198
218884656 159 ILPG--KGL---RIHMTMKQPYLGKLEWVSKQGGQGE--- 190
126460593 153 FTTPREGTDlllRVTMTMRMPGLGKLEWIKEREKKAAPAK 192
18314155  153 FTTPREGTDlliRVTLTMRSPGLGKLEWVKEKKPAAKKA- 191
126465733 152 PLPG--KGL---RVQLTMRQPFLGKIEWIKKEIEKQKRS- 185
297527594 152 PLPG--KGL---RVQLTMRQPFLGKIEWIKKEIEKQKKS- 185
124027330 151 MPSEPIGRP---RIQLTMRQPYLGKTEWHKRKRIEAK--- 184
296243100 162 PMPG--KGL---RVHMTMRQPGMGKVGQGGRVEQEG---- 192
159041701 169 YVST--ANGirlNVSMTMRQPFLGKIEWIEEATKAKKKPQ 206
305662653 151 LGPQQ-RLP---RINMTMKQPYLGKLEWIESSSKKS---- 182
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap