3V05,5D3I,3URY,4O1N,6UCD,3R2T


Conserved Protein Domain Family
SSL_OB

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pfam09199: SSL_OB 
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Staphylococcal superantigen-like OB-fold domain
This OB-fold domain folds into a five-stranded beta-barrel. Members of this family are found in various staphylococcal toxins described as staphylococcal superantigen-like (SSL) proteins that are related to the staphylococcal enterotoxins (SEs) or superantigens. These SSL proteins of which 11 have so far been characterized have a typical SE tertiary structure consisting of a distinct oligonucleotide/oligosaccharide binding (OB-fold), this domain, linked to a beta-grasp domain, family Stap_Strp_tox_C, pfam02876. SSLs do not bind to T-cell receptors or major histocompatibility complex class II molecules and do not stimulate T cells. SSLs target components of innate immunity, such as complement, Fc receptors, and myeloid cells 2,3,4,5,6,7,8]. SSL protein 7 (SSL7) is the best characterized of the SSLs and binds complement factor C5 and IgA with high affinity and inhibits the end stage of complement activation and IgA binding to FcalphaR.
Statistics
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PSSM-Id: 401224
Aligned: 11 rows
Threshold Bit Score: 94.2949
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3V05_B  28 KSLKYYYSKPSIELKNLDGLYRQK-VTDKGVYVWKDRKDYFVGLLGKDIEKYPQGEHDKQDAFLVIEEETVNGRQYSIGG 106 Staphylococcus aureus...
Q2G0X8  42 KKLKAYYNQPSIEYKNVTGYISFIqPSIKFMNIIDGNSVNNIALIGKDKQHYHTGVHRNLNIFYVNEDKRFEGAKYSIGG 121 Staphylococcus aureus...
5D3I_B   8 EDLRAYYTKPSFEFEKQFGFMLKPwTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQLKKYSVGG 87  Staphylococcus aureus...
3URY_A   6 KDLRAYYTKPSLEFKNEIGIILKKwTTIRFMNVVPDYFIYKIALVGKDDKKYGEGVHRNVDVFVVLEENNYNLEKYSVGG 85  Staphylococcus aureus...
4O1N_F  25 SELKHYYNKPILERKNVTGFKYTD-EGKHYLEVTVGQQHSRITLLGSDKDKFKDGENSNIDVFILREGDSRQATNYSIGG 103 Staphylococcus aureus...
Q2G0X4  41 QDLSEYYNRPFFEYTNQSGYKEEG-K----VTFTPNYQLIDVTLTGNEKQNFGEDIS-NVDIFVVRENSDRSGNTASIGG 114 Staphylococcus aureus...
6UCD_A  15 eALYRYYTGKTMEMKNISALK----HGKNNLRFKFRGIKIQVLLPGNDKSKFQQRSYEGLDVFFVQEKRDKHDIFYTVGG 90  Staphylococcus aureus
Q2G2Y0  44 KDLHRYYSSESFEFSNISGKVENY-NGSNVVRFNQENQNHQLFLLGKDKEKYKEGIE-GKDVFVVKELIDPNGRLSTVGG 121 Staphylococcus aureus...
Q2G2X8  44 nMLHQYYSEESFEPTNISVKSEDY-YGSNVLNFKQRNKAFKVFLLGDDKNKYKEKTH-GLDVFAVPELIDIKGGIYSVGG 121 Staphylococcus aureus...
3R2T_B  61 NKLHQYYSGPSYELTNVSGQSQGY-YDSNVLLFNQQNQKFQVFLLGKDENKYKEKTH-GLDVFAVPELVDLDGRIFSVSG 138 Staphylococcus aureus...
Q2G1S6  45 fDLRDYYSGASKELKNVTGYRYSK-GGKHYLIFDKNRKFTRVQIFGKDIERFKARKNPGLDIFVVKEAENRNGTVFSYGG 123 Staphylococcus aureus...
3V05_B 107 LSKTN 111 Staphylococcus aureus subsp. aureus NCTC 8325
Q2G0X8 122 ITSAN 126 Staphylococcus aureus subsp. aureus NCTC 8325
5D3I_B  88 ITKTN 92  Staphylococcus aureus subsp. aureus NCTC 8325
3URY_A  86 ITKSN 90  Staphylococcus aureus subsp. aureus NCTC 8325
4O1N_F 104 VTKSN 108 Staphylococcus aureus subsp. aureus NCTC 8325
Q2G0X4 115 ITKTN 119 Staphylococcus aureus subsp. aureus NCTC 8325
6UCD_A  91 VIQNN 95  Staphylococcus aureus
Q2G2Y0 122 VTKKN 126 Staphylococcus aureus subsp. aureus NCTC 8325
Q2G2X8 122 ITKKN 126 Staphylococcus aureus subsp. aureus NCTC 8325
3R2T_B 139 VTKKN 143 Staphylococcus aureus subsp. aureus NCTC 8325
Q2G1S6 124 VTKKN 128 Staphylococcus aureus subsp. aureus NCTC 8325
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