Conserved Protein Domain Family
KLF18_N

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cd21575: KLF18_N 
N-terminal domain of Kruppel-like factor 18
Kruppel-like factor 18 (KLF18), or Krueppel-like factor 18, is a product of a chromosomal neighbor of the KLF17 gene and is likely a product of its duplication. Phylogenetic analyses revealed that mammalian predicted KLF18 proteins and KLF17 proteins experienced elevated rates of evolution and are grouped with KLF1/KLF2/KLF4 and non-mammalian KLF17. KLF18 has been found in the human testis, though it was previously hypothesized to be a pseudogene in extant placental mammals. Mouse KLF18 expression data indicates that it may function in early embryonic development. It belongs to a family of proteins, called the Specificity Protein (SP)/KLF family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. Members of the KLF family can act as activators or repressors of transcription depending on cell and promoter context. KLFs regulate various cellular functions, such as proliferation, differentiation, and apoptosis, as well as the development and homeostasis of several types of tissue. In addition to the C-terminal DNA-binding domain, each KLF also has a unique N-terminal activation/repression domain that confers specificity and allows it to bind specifically to a certain partner, leading to distinct activities in vivo. This model represents the N-terminal domain of KLF18. Some KLF18 isoforms have duplicated N-terminal domains.
Statistics
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PSSM-Id: 410566
Aligned: 30 rows
Threshold Bit Score: 174.875
Created: 21-Jan-2020
Updated: 17-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_001345367  664 NQALCGEQMTTSt------------------------GNQALYGGQMTTSTSNQTLcgeqtttsTSNQTLCGEQVTTSTG 719  Homo sapiens
NP_694742     181 DWTSYNSHMTTRn-----------------------gGHLTLYESQMTAPSCSQTLhpnqiitsFSEQNYFEDQQSNLAV 237  house mouse
XP_021056114  217 DQVSYYSHMTTRn-----------------------gGHLTLYGSQMVAPSCSQAPhpnqiitsFSEQNSFGDQQSNPAA 273  shrew mouse
XP_028637074  190 DQTSYYSQLTTRd-----------------------gGLLSLYGNQMTAPNYSQALhpsq-iltFSEQNPLGDLKRNLIA 245  Grammomys sur...
XP_008263858  265 HQTLYGGQMNTPa------------------------SDQTLYVGQMNSPAGDQTLyggqvnspIGDQTLYGGQMNLTTA 320  rabbit
NP_001102827  188 SDDSYYSQMTTKy-----------------------gGHLTLYESQMIAPSCNQVLdtdqfvtsFYEQNPFGDQQRSPVT 244  Norway rat
XP_028629204  196 DQTSYYSQLTTRn-----------------------gGHLTLYGNQMTAPSYSQALhpneiltsLSEQNPLGDSQRNLVA 252  Grammomys sur...
XP_233185     165 ITTMYESQWRTLgnhpvapsgyhegqapnmdhlvdsvSNQTFIGDLEMEPSCNHVLytdqfitsFSEQNPFGDQQRSPVA 244  Norway rat
XP_012893073  272 DPTIYGGQMPDPs------------------------GDHSTNGGQIPIPSFGQTInmgqlptpGGEQTINWGQMPIPGG 327  Ord's kangaro...
RLQ57714      587 NQTFYRSHITPAtedlthg-----------aqtkpynSNQTFYRSHITLATEDLNQgaq--tksYNSKQTFYRWHITPAT 653  Chinese hamster
NP_001345367  720 NQALYGGQMm-TSTGNQTLYWGQMMTSTGnqnlcgeQMTTStgnQALYGGQMTTSTSNQTLCGEQMTTp-TSNQTLCGEQ 797  Homo sapiens
NP_694742     238 NNGFYGNQVi-LPNGYQAFYEPQMRANFDqt---ndQMKSFs-gQNVCKGQENLLSGECSLSGYQTSGy-RCDQDLIVNP 311  house mouse
XP_021056114  274 DKGIYGDQVmlPNGGYQVFCEPQMRANCDqt---ndQMKSFr-gQNVCKGQENLLRGEHSLSGYQTSDy-RCDQGLIVNP 348  shrew mouse
XP_028637074  246 DNRFYGDQMi-TPNGYQIFYEPQKIDNCDqik-hdyQMTSFs-gQNVCRSQENFFSGEYSLSGYQTSGy-RCDQNLTENH 321  Grammomys sur...
XP_008263858  321 DQTLYGSQMnaPSGEHQTLYGGQMNTPASdqnlyvrQMNSPtgdQTLYGGQVNLTTADQTLYGGQMNApiGDHQTLYGGQ 400  rabbit
NP_001102827  245 ENKFYGDQMi-VPNAYQAFYEPQVRDNSDqin--fdSRMASfsgQNICSGQESIFQDEHSLSGFQTSGy-RCDQDWIMNH 320  Norway rat
XP_028629204  253 DNRSYGDQMi-TPNGYQVFYEPQKRDNCDqik-hhyQMTSFg-gQKVCKGQESLFSGEYSLSGYQTSGy-RCDQNLIENH 328  Grammomys sur...
XP_233185     245 DNRFYADQKi-LPNGYQTFYEPQMSTNYQ-------ITCVCg--QNVCRCQEILLSGEHLLSEYQTSGy-RYDQDLIVNL 313  Norway rat
XP_012893073  328 DQTIYGELMp-TPVGEQTIKGSQMPVPGDnqtvngeQMPVSgvdQTMYGGQMSVPGGDQAVSGGQMPVp-GGDQTINVGQ 405  Ord's kangaro...
RLQ57714      654 EDLTHGIQMt-PHNINQSFYSSQITPTTEdlt-hgaQTTPNnsnQSFYNSQITPATEDLTQGAHTKPY--NSNQTFYRSH 729  Chinese hamster
NP_001345367  798 VTTST-GNQalYRGQITTsTSNQTLCGEQMt-------------tSTSNQTLCGEQvttstgnqalyggqmmtstgnqnl 863  Homo sapiens
NP_694742     312 QVTSPiGGQplSDFQTQTsSFDTALPGSKRtr------------pSAEDNLACPLEtspt-------------------- 359  house mouse
XP_021056114  349 QATSSiGGQplSDFQIPTsNVDTTLHGSKRtr------------sSAEDNLDCPLEtsps-------------------- 396  shrew mouse
XP_028637074  322 QVTSPiGVQllYDFQMPIsSFDTTFHGTKRtt------------sSAEDNLDCHPEtsps-------------------- 369  Grammomys sur...
XP_008263858  401 MNTPA-SDQtlFVGQMNSpTGDQTLYQGQLn-------------tTTNDQTLFVGQmhsp-------------------- 446  rabbit
NP_001102827  321 QVISPiGGQtlYDSQKPTsTFNTTPHGSKRtt------------sSAEDNLAWHPEtsss-------------------- 368  Norway rat
XP_028629204  329 QVTSLiDGQplYDFQMPIfGFDTILHGTQTt-------------fNAEDSLDFHSEksfs-------------------- 375  Grammomys sur...
XP_233185     314 QVTSPiGGEplHDSQIPNsNFDTTSCGTKRtt------------sSEEDNLAWHPEtsl--------------------- 360  Norway rat
XP_012893073  406 MPIPT-GVQtiYGRLMPVpGGDQTIYEELMp-------------lPGAEQTINGGQmpip-------------------- 451  Ord's kangaro...
RLQ57714      730 ITPAT-EDLn-HGAQTTPhNINQSFYSSQItpttedlthgaqttpNNSNQSFYSTQitst-------------------- 787  Chinese hamster
NP_001345367  864 yggqnmtstdnqALYGGQMATYSGNQTLYGdqmlt--------------------lqvgnMTTLTDDHs----------- 912  Homo sapiens
NP_694742     360 ---------seeTLYLGQMRTSVDQNFYSSqngtpni-----------------kesldpQVTSFSLQa----------- 402  house mouse
XP_021056114  397 ---------seeTFFLGQMKTSVDQDVYPSqngtlni-----------------eesldpRVTSLSNQa----------- 439  shrew mouse
XP_028637074  370 ---------seeTFYLGQMRISVDHNVCPSqngtpki-----------------eesldsLVTSLSNQa----------- 412  Grammomys sur...
XP_008263858  447 --------tddqTLYEGMMNLTTANQTLYGgqmntpai--------------dqtlyvgqMNSPTGDQtlyvgqmnstgd 504  rabbit
NP_001102827  369 ---------seeTLYMGQMRASVDQNVYASqngtant-----------------eeslepEVTSLSNQa----------- 411  Norway rat
XP_028629204  376 ---------seeMFYFSQMRASLDQNVYPSqngtpni-----------------desldsQVTLLSNQa----------- 418  Grammomys sur...
XP_233185     361 ---------sseETFLDQMRTSVDQNVYPShngtlki-----------------eeslepQVTSLSNQa----------- 403  Norway rat
XP_012893073  452 --------gsvqTMYGAQMPIPSGVQTLCGgqmpvpsgvqtsleeqtmaflakhafgsghVVTCNSTQn----------- 512  Ord's kangaro...
RLQ57714      788 ---------sedQTHGAQMTLYNSNQSFYSs-----------------------------QITPTTEDl----------- 818  Chinese hamster
NP_001345367  913 --lYGGYMMSHQFSSLPYPG--FLCFSSSHLIQgq-----lpKQKTQSCQFWKNPEV 960  Homo sapiens
NP_694742     403 --pYVGESSYPSCSPLIQKQp-QKNSSASSLVQrqhp-emklDFKTQSPVSQKDPSP 455  house mouse
XP_021056114  440 --pYVGESSYPSGSPLIHKQp-QKNSSASSLVQgphp-emklDLKPQSPVSQKNPHP 492  shrew mouse
XP_028637074  413 --pYVGESSYTLSFPVIQRQp-QESSSPSGLIQgqhp-emklDLKTQSPVSQKTCCP 465  Grammomys surdaster
XP_008263858  505 ktlYVGQINLPTGDQTLYGG--QMMPFTGQLLEkq-----nwNLQTQRYQPPKNPEL 554  rabbit
NP_001102827  412 --pDVGESSDSSSSPLIRIQs-QGISSASGLDQgqhp-qirlDLKTQSPVSPEKPPT 464  Norway rat
XP_028629204  419 --pYVSESSYPSSSPVIKRQp-QESSSPSGLIQeqhp-emnlDLKTQSHAFKKTPYP 471  Grammomys surdaster
XP_233185     404 --pYVGESSDTSNSPLIQIQp-QEISSASGLDQgqhp-eiklDLKTQSPVSLKNPHN 456  Norway rat
XP_012893073  513 --lSWDSVPTQQLLSLTCPQlvHVSRSPSTQGQapd----kwALKTQSFQLPQHPAR 563  Ord's kangaroo rat
RLQ57714      819 --tHGAQTTPNNSNQSFYST--QITPTTEDLTHgaqtkpynsNQTFYRSHITPATED 871  Chinese hamster
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