2OST


Conserved Protein Domain Family
PDDEXK_5

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pfam11645: PDDEXK_5 
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PD-(D/E)XK endonuclease
This family of endonucleases includes a group I intron-encoded endonuclease. This family belongs to the PD-(D/E)XK superfamily.
Statistics
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PSSM-Id: 431975
Aligned: 17 rows
Threshold Bit Score: 149.04
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2OST_D            3 STKLKGDIAQQAAIMRALKMGWGVLKPLGDRLSYDLVFDVEGILLKVQVKSSWKSEKtgNYVVDNRRTRTNRRNIVRSPY 82  Synechocysti...
WP_012941574      5 NTKQTGDETEAQIIAALIEHGYSVSIPFGDNDRYDLVVDTEHGLRRVQCKTGWIEDE--VVRFKTASKTTVDGTVALTDY 82  Haloterrigen...
WP_066144411      8 NTKDRGDETEAKVIHEMISHGYSVSIPFGDNDKYDLIVDDDGQLYRIQCKTAWQNKEe-TIRFNTHSQTTKKGNYHENQY 86  Haladaptatus...
CQH61498          2 QSHRKGDLTEAIAIAEVKRRGIPVSVPFGDNERYDLILESEAGLYRVQVKTGTFDGE--TVRFKGYSIHTNSEGNVHNAY 79 
WP_017749489      2 DTKLKGDIAEQAAILHALKRGWGVLKPVGDRLPYDLAFDVQGNLIKIQVKNAWFDEPsgNYVVDNRRTKTNRRLMLRDVY 81  Scytonema ho...
WP_045054052      2 DTKLRGDIAEQAAVLHALKRGWGVLKPVGDRLAYDLVFDVYEVLIKIQVKYAWWDEPssNYIVDNRRTKTNRRLMIREGY 81  Aliterella a...
ASGPB:GKIL_1265   2 DTKLRGDVAEQAAILQALNHELGVLRPIGDRLPYDLVFDVSGTLFKIQVKCAWLDLSsgNYVVDNRRTKTNRRVMLREAY 81 
EON24873         37 HTKDKGDLGTAKAHADLVGLGFTVLFPATEHAAFDLVAYRDGTFHRVQVKYR--SARsgTISVQFRSVWADRNGTHMKPS 114
WP_036396434      5 HTKDKGDLGVAKAHADLVAKGFDVLFPATEHAPFDLVAHSDGIFHRIQVKYR--SAPsgVVSVNLRSTWSDRHGVHSTPI 82  Mycolicibact...
WP_019512141      5 HTKDKGDLGVAKAFSDLVAKGYTMLFPATEHAAFDLVAYRAGVFVRVQVKYR--CARagVIKLNLRSTWADRHGVHSVPI 82  Mycolicibact...
2OST_D           83 RgNDFDFAVAYVEELELFYVFPVDVFIs-yGSEIHLVETDKRQRKpRSFGYREAWHLI 139 Synechocystis sp. PCC 6803
WP_012941574     83 D-GDIDAFAVRCKDTDELYWVPLEAAG---RKNTYLRLTEPEIDH-PNVKRAERYRFE 135 Haloterrigena turkmenica
WP_066144411     87 H-GKIDAFVVRYPRNGKTYWIYVNEAT---VQKMELRFD-AKIDH-PSINWAKEYEFT 138 Haladaptatus sp. R4
CQH61498         80 D-GDVDYFLVYCHDLETMYLV-AEEAV---TSNMRLRVEDPEVEQ-PSINWAADYEFD 131
WP_017749489     82 NpSDFDFALVYIESLDLFYVFPVEVFIs-yGSEIHFVETDKRQRKpRSAKYRDAWKLM 138 Scytonema hofmannii
WP_045054052     82 KqSDFEFALAYIEQLDLFYVFPVDIFIg-yGSEIHLVEATKRQRKtRSANYRDAWGLI 138 Aliterella atlantica
ASGPB:GKIL_1265  82 RvSDFDFALAYIQPIDLFYVFPVHIFId-yGSEIHLVEADKRQRKpLSATYRDAWHLI 138
EON24873        115 DkAEVDVLCIYCPQTDSCYY----LRPtdfRRSVTLRLVPSKNGQqRGVLPIAAFRAF 168
WP_036396434     83 DkNSVDTICIYCPETDQCYY----LRPadhNASVTLRITPVKNGQqKRILNAADHREL 136 Mycolicibacterium cosmeticum
WP_019512141     83 DkGAVDVICIYCPDTDECYY----IRPsdhGVSVNLRIAAPRNGQqKRILAAAAFRDL 136 Mycolicibacterium neoaurum
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