4DKN,6M9X,4DKM


Conserved Protein Domain Family
GFP

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pfam01353: GFP 
Click on image for an interactive view with Cn3D
Green fluorescent protein
Statistics
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PSSM-Id: 426217
Aligned: 10 rows
Threshold Bit Score: 159.272
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4DKN_B         9 ATHDIHLHGSINGHEFDMVGGGKGDPNAGSLVTTAKSTKGA-LKFSPYLMIPHLXY--YQYLPYPDG-PSPFQVSMLEGs 84  Florida lancelet
EDO42459       8 MKLHLILEGSVNGHCFEIHGEGEGKAFEGEQWSKFTVKKGGpLPFSFDLIAPCLKYgsKPFVKYPDDmTDFFKAAVENG- 86  starlet sea ane...
6M9X_A         5 KTHELHIFGSFNGVEFDMVGRGIGNPNEGSEELNAKFTKGP-LKFSPYILVPHLXY--YQYLPFPDG-MSPFQAAMHDGs 80  Florida lancelet
4DKM_D         3 TTHEVHVYGSINGVEFDLVGSGKGNPKDGSEEIQVKSTKGP-LGFSPYIVVPNIXf--HQYLPFPDG-MSPFQAAADDGs 78  Florida lancelet
EEN59117       5 TAHDLHIFGSVNGAEFDLVGGGKGNPNDGTLETSVKSTRGA-LPCSPLLIGPNLGYgfYQYLPFPGG-ASPFQTAITDG- 81  Florida lancelet
EEN59118       5 TAHDCHMFGSINGHEFDLVGGGNGNPNDGTLETKVRSTKGA-LPFSPVILAPNLGYgyHQYLPFPAG-TSPYQQAITNG- 81  Florida lancelet
EDO41650      64 MKLHFKMEGSVNGHCFEIQGVGEGKAFDGEHWSKLCVVKGKhLPFSFDILMPSMSYgtKQFAKYPAGmTDFFKAAVENG- 142 starlet sea ane...
2_pfamImport   1 MTMKYKMEGCVNGHPFTITGVGNGNPYD---------------------------------------------------- 28 
1_pfamImport   1 MTMKYKMEGCVNGHPFTIRGNGNGNPYETKQPVT--------LPQNHVVEHRIVRTg----------------------- 49 
XP_002603213   8 TNLDLHIYGSINGMEFDMVGGGSGNPKDGSLAVNVKSTKGA-LRVSPLLVGPHLGYghYQYLPFPDG-ASPFQAAVNNG- 84  Florida lancelet
4DKN_B        85 GYAVYRVFDFE-DGGKLSTEFKYSYEGSHIKADMKLMGSGFPDDGPVMTSQIVDQDGCVSKKTYLNNnTIVDSFDWSYNL 163 Florida lancelet
EDO42459      87 GLSWERTMSLEqDGGFCSVVNTSKLDKDGLHYHMTFQGINLDPNGPVMKKMTMGWLPSVETNIPRGN-TLVGDINMLLKV 165 starlet sea ane...
6M9X_A        81 GYQVHRTIQYE-DGASVTAHYRYTYEGSHIKGEFQVIGTGFPPDGPVMTNKLTAMDWSVTKMLYPNDkTILSTADCSYTT 159 Florida lancelet
4DKM_D        79 GYVVHRTIQFE-DGASLTGNYRYSYDGGHIKGEFHVVGSGFPADGPVMTKSLTAVDWSVATMLFPNDtTVVSTIDWTCPT 157 Florida lancelet
EEN59117      82 GYQVHRVFKFE-DGGVLNCNFRYTYEGGKIKGEFQLIGSGFPAGGPVMSGGLTTLDRSVAKLQCSDDcTITGTNNWSFCT 160 Florida lancelet
EEN59118      82 VYQKHRTFKFE-DGGVMTINFRYTYSGNKIKGEFHVVGSGFPDDGPVMTNSLQQHDHNVERLMVLGDkTIGSDNMWTFTE 160 Florida lancelet
EDO41650     143 GLSWERTMTFE-DGGYCTIVNTSELKDGSLHYHTNFHGINLKPDGPVMQKRTMGWLPSVETNIPRRD-TLLGDINMLLKV 220 starlet sea ane...
2_pfamImport  29 ------------------------LEGKCFHHKSMFHGVNFPADGPIMKKETTGWDPSFEKMTVSEG-LLKGDVTMFLVL 83 
1_pfamImport  50 ------------DGDKVNLVETAEAHVNPL----TKQPVTLPPNHVVEHR----------------------------IL 85 
XP_002603213  85 GYQMHRSFNFE-DGAVLTATYNYSYSGGKIQGEFHLVGSGFPDDSPVMTNALTGLDRSVSKLMCTSDdKLVESVHWSYRT 163 Florida lancelet
4DKN_B       164 QNG--KRYRARVSSHYI------FDKPFSADLMKKQPVFVYRKCHVKATKTEVTLDEREKAFYEL 220 Florida lancelet
EDO42459     166 NDG--SFLRVKFVTVYR------FMKPVPAGFKMPPHHFIAFKLTRVENDADCNVVLLHEWGKAF 222 starlet sea anemone
6M9X_A       160 TAG--KRYQSKMRENNT------FAKPMAADILQKQPMFVFRKSELQHSKTELTFKEWQKAFTDV 216 Florida lancelet
4DKM_D       158 TSG--KRYHATLRTNYT------FAKPIAATILQKQPMFVFRKTEVKASDAEINLKEWQKAFHDL 214 Florida lancelet
EEN59117     161 TDG--KRHQADVQTNYI------FAKPLPAGLKEKMPIFLGHQIEVKASKTEITLCEKVKAFIDT 217 Florida lancelet
EEN59118     161 KGGkdKRYKAEVMTNAT------FAQNLQPGLKNVMPLFVFRKVDIDCSKTEVTLIEREKVFQDL 219 Florida lancelet
EDO41650     221 NDG--SFLRVQFETVYR------FMKPVPAGFKMPPHHFMAYRLTRVDNDEHCDTVIQHEWSEAF 277 starlet sea anemone
2_pfamImport  84 KGG--GYHKCQFHTTYK------TKQPI----TLPPNHVVEHYIVRTGDGDKVNLVEIAEAHVNP 136
1_pfamImport  86 RTG--DGDKINLVETAEahvnplTKQPV----TLPPNHVVEHRILRTGDGDKINLVETAEAHVNP 144
XP_002603213 164 SSG--GRYRATVQTNFT------FAKPIAAGLKNNMPMFVFRQLEVTGSKTEIGLQEQQKAFSTV 220 Florida lancelet
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