1BCM


Conserved Protein Domain Family
Mu-transpos_C

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pfam09299: Mu-transpos_C 
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Mu transposase, C-terminal
Members of this family are found in various prokaryotic integrases and transposases. They adopt a beta-barrel structure with Greek-key topology.
Statistics
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PSSM-Id: 430512
Aligned: 103 rows
Threshold Bit Score: 43.6802
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1BCM_B        241 LLLPAEAVNVSRKgeftlkvgGsLKGAKNVYYNMALMNAGVK----------KVVVRFDPQQLhSTVYCYTLDGR-FICE 309 Escherichia vi...
jgi:Tgr7_0411 399 MFWDREERTVSDC--------R-IRFANREYSAPELIQWNTK----------KVFVEFNLRSD-AMVRVLDLSGR-WICD 457
WP_011524189  516 MLCSREQRMVREC--------S-VTVGKRRFIGADFT----AvkrlhdvsncEVMVAYDPLDL-DRVAVLDLDGN-LICW 580 Candidatus Kor...
ACR32484      398 ivRPREKRTVRRQ--------M-VELHKRQYYAAELALYDGK----------SLTIEYDLHDD-RTVWLYDAKDQ-FVCQ 456
Q3IGI7        392 VMLPRETVNIRRG--------R-FRLHQRDYSADFLHQFNGQ----------ELIAAYDMHDD-SYTKLYKLNGE-FLMV 450 Pseudoalteromo...
YP_009196052  499 MSRPEFIRKPDRG--------W-VSWNNNHYFNLKLLDFDRE----------EVVIGIDIHNA-ESVQVRTKDGR-FICE 557
jgi:HSM_1871  506 MSRPEFIRTPERG--------W-ISWCNNKYFNTKLLAVDGQ----------EVVIGIDIHNA-ESIQVRTKDGR-FVCD 564
EHO41121      552 LMMEERRTTIQRN--------G-IRFNNRFYWNEALYG-RRE----------AVVIKYDWMYP-EKILVFEPTGE-FICE 609
Q30W02        479 LMMAKEVRKLSRE--------G-IRIFGERYYAPELYS-RTH----------AVQVRYDIGDL-SSLLVYSEDGKhFICE 537 Desulfovibrio ...
CAO80140      485 MMLSVERKAIRNE--------G-IVLNKLKYWHPALVDHIGK----------PVVIRYDLADA-RWVLVYDEADV-FICQ 543
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