Conserved Protein Domain Family
DUF2439

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pfam10382: DUF2439 
Protein of unknown function (DUF2439)
This domain can be found in proteins that have been implicated in telomere maintenance in Saccharomyces cerevisiae and in meiotic chromosome segregation in Schizosaccharomyces pombe. It can also be found in Mte1 (Mph1-associated telomere maintenance protein 1), human zinc finger protein ZGRF1 (C4ORF21) and fission yeast Dbl2. Mte1 is a D-loop-binding protein that interacts and stimulates the helicase and fork regression activities of Mph1 while inhibiting the ability of Mph1 to dissociate recombination intermediates. Mph1 and Mte1 interdependently colocalize at DNA damage-induced foci and dysfunctional telomeres. Mte1 is indicated to play a role in regulation of crossover recombination, response to replication stress, and telomere maintenance. The fission yeast, Dbl2 is needed for cellular resistance to the topoisomerase I poison camptothecin, forms DNA damage-induced foci, and is needed for the optimal recruitment of Fml1 to DNA damage, while the human ZGRF1 protein has been linked to DNA cross-link repair and mutations of it have been found in a variety of human tumors. ZGRF1 is a 5'-to-3'helicase that interacts with RAD51 and stimulates homologous recombination and, thus, promotes the repair of replication-blocking DNA lesions. Having said that, there is no evidence to suggest that this domain is implicated in DNA damage resistance or for nuclear focus formation.
Statistics
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PSSM-Id: 463065
Aligned: 77 rows
Threshold Bit Score: 50.582
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EGG07511              34 IKK-YSCMYTSDVYKNKKVWHDGEVRLHHVNS----KAYLYSD--RSDRLAETFVKaasrrsrltsqpnagpscqlpdTF 106 
EFA75413             552 IKR-YNVQYTHQKQKKAKLWSDGYIK---VNG----RKVILCEldTNKNIDSKFISa---------------------SM 602 
CAQ42294               6 iKRtYECLYTHQKIQKNKKWQEGYCE--VIASyggiKMNLLNQ--SRTCIESSLSCe---------------------AS 60  
XP_001613878           6 VKRtYECLYTHQKVQKSKKWQEGYCE--IIASygviKINLLNQ--NRSCVESSLSNv---------------------VS 60  
KDE07673              11 VKR-YHCLYSSQINNKTKTYQDGFIRHHHLNS----RLYLLSA--DNQPLAESFYRpprnqp-----------cvfddRF 72  
Q6CF82                10 VDE-YVVLYTPQVRQKQKKWHDGSAKFHHFNN----LLVLYDD--SNHKIDSTFLGr---------------------GR 61   Yarrow...
EEA07436               2 lkK-LKVLYTRHKTQKSKVWHDGMVT--IFDTngiyKVSLYKCteDCH------------------------------KG 48  
Q5CST9                 2 kKQ-FEVLYTRQKTQKTKTWHDGVVV--IDNIkginRISLYKTdeNGY------------------------------KG 48   Crypto...
WGS:AATM:SJAG_02616   11 VLQ-FEVLWTAHKRKKNKQWQDGTMKFHSFNQ----RVVLYDS--EYRVIATSFLPm---------------------RS 62  
XP_013025352           7 VLH-YQVLWTSDKVKKSKVWKDGTMRFHTFNN----HGILYDS--QNRVIDESFIF----------------------NQ 57  
EGG07511             107 ALTEDDEIEFNQveddhqlrascYLAQIVNLIE 139 
EFA75413             603 IFEEDAEFETDG-----------FLIRITEIVN 624 
CAQ42294              61 FNNLQEEIELPK-----------HLIQFVDVTN 82  
XP_001613878          61 FHNVEEEIELPN-----------HLIQFVDVSN 82  
KDE07673              73 TLEDDQEVEFDEq---------gFSVQVGELES 96  
Q6CF82                62 VLEIGEELQIDN-----------HLISLEDLTK 83   Yarrowia lipolytica
EEA07436              49 DLIEAYNSRQSLdnimgslnfqgYLVELNDENC 81  
Q5CST9                49 DIVESFSSHVQKinisk-isfpgHLIELVNEEA 80   Cryptosporidium parvum
WGS:AATM:SJAG_02616   63 TLSVGEELELDR-----------FLVTLEALQN 84  
XP_013025352          58 KIQIDAHLELNR-----------TLIYVEDLQA 79  
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