Conserved Protein Domain Family
7tmA_GPR45

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cd15403: 7tmA_GPR45 
G protein-coupled receptor 45, member of the class A family of seven-transmembrane G protein-coupled receptors
This subgroup includes the human orphan receptor GPR45 and closely related proteins found in vertebrates. GPR45 is also called PSP24 in Xenopus and PSP24-alpha (or PSP24-1) in mammals. GPR45 shows the highest sequence homology with GPR63 (PSP24-beta, or PSP24-2). PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Mammalian PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.
Statistics
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PSSM-Id: 320525
Aligned: 6 rows
Threshold Bit Score: 507.849
Created: 13-Jan-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of some class A family members with bound ligands (peptides or chemicals), agonists, or antagonists
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
Q9Y5Y3        35 ISLAIVMLLMTVVGFLGNTVVCIIVYQRPAMrsaINLLLATLAFSDIMLSLCCMPFTAVTLItvrWHFGdhFCRLSATLY 114 human
P79945        35 MLLAIIMILMIAIAFLGNAIVCLIVYQKPAMrsaINLLLATLAFSDIMLSLFCMPFTAVTIItgsWLFGtqFCQISAMLY 114 African clawed ...
CAG05802      42 VTLAALMIFMITIGFLGNAIVCLIVYQKPAMrsaINLLLATLAFSDIMLSLLCMPFTAVTVAsadWSFGseFCRASIMLY 121 spotted green p...
XP_003218788  35 ILLAIIMLLMIAVGFLGNAIVCLIVYQKPAMrsaINLLLATLAFSDIMLSLFCMPFTAVTIItvnWNFGahFCRISGMLY 114 green anole
XP_005998076  38 ILLAIVMMCMIAIGFLGNAIVCLIVYQKPAMrsaINLLLATLAFSDIMLSLLCMPFTAVTIIttnWHFGayFCRVSAMLY 117 coelacanth
XP_007883327  36 ILVTIVMMSMVAIGFLGNTIVCLIVYQKPAMrsaINLLLATLAFSDIMLSLMCMPFTTATIItvdWIFGnyFCRISAMLY 115 elephant shark
Feature 1        #  #                                         # #####                            
Q9Y5Y3       115 WFFVLEGVAILLIISVDRFLIIVqRQDKLnpRRAKVIIAVSWVLSFCIAGPSLTGWtlve---vparAPQCVLGYTelpA 191 human
P79945       115 WFFVLEGVAILLIISVDRFLIIVqRQDKLnpHRAKIMIAASWVLSFCISLPSVVGWtlve---vptrAPQCVLGYTefsA 191 African clawed ...
CAG05802     122 WLFVLEGVSILLIISVDRFLIIVqRQDKLtpHRAKLLIAGSWVLSLCVALPSVVGWrkssakiggawAPQCVLGYSdsvA 201 spotted green p...
XP_003218788 115 WFFVLEGVAILLIISVDRFLIIVqHQDKLnpHRAKVMIAISWAFSFCVSFPSVVGWtfve---vpsrAPQCVLGYTelpA 191 green anole
XP_005998076 118 WFFVLEGVAILLIISVDRFLIIVqRQDKLnlHRAKIMIAISWGISFCISFPSVVCWtive---vparAPQCVLGYTefpA 194 coelacanth
XP_007883327 116 WFFVLEGVAILLIISVDRYLIIVqRQDKLnpHRAKMMIVISWVFSFCISFPSVVGWtvve---vptrAPQCVLGYTesmA 192 elephant shark
Feature 1        #  ### ### ##                                                                   
Q9Y5Y3       192 DRAYVVTLVVAVFFAPFGVMLCAYMCILNTVRknavrvhnqsdsldlrq----ltraglrrlqrqqqvsvDLSFKTKAFT 267 human
P79945       192 DRVYAVMLIVAVFFIPFSVMLYSYLCILNTVRrnavrihthadslclsq----vsklglmglqrphqmnvDMSFKTRAFT 267 African clawed ...
CAG05802     202 DRGYTVLLAVAVFFVPFAIMLYSYMCILNTVRrntlrihnhtsersclpglnqvskmrltglqrppqvkvDMSFKTRAFT 281 spotted green p...
XP_003218788 192 DRAYAVMLLVTIFFVPFSIMLYSYLCILNTVRrntvrihnhtenvclsq----vsklglvvlpkahqmnvDMSFKTRAFT 267 green anole
XP_005998076 195 DRVYVVLLVVSVFFIPFSIMLYSYLCILNTVRrnavrihnhadslclsq----vsklglmglqrphqmnvDMSFKTRAFT 270 coelacanth
XP_007883327 193 NRVYAVLLLVTIFFVPFGVMLYSYLCILNTVRrnavriqnhadslclsq----vsklglmglqrphqlnvDMSFKTRAFT 268 elephant shark
Feature 1                    #  ## ##  #           ## ###  #  ##                     
Q9Y5Y3       268 TILILFVGFSLCWLPHSVYSLLSVFsqrfycgssFYATSTCVLWLSYLKSVFNPIVYCWRIKKFREAC 335 human
P79945       268 TILILFIGFSLCWLPHSVFSLLSVFsrtfyysssFYSISTCTLWLTYLKSVFNPVIYCWRIKKFREAC 335 African clawed frog
CAG05802     282 TILILFVGFSVCWLPHTVVSLLAVFsrrfyyssvFYPLSTGALWLSYLKTVFNPVIYCWRIRKFREAC 349 spotted green pufferfish
XP_003218788 268 TILILFVGFSLCWLPHTVFSLMSVFsrqfyygpsFYITSTCVLWLSYLKSVFNPVIYCWRIKKFREAC 335 green anole
XP_005998076 271 TILILFIGFSVCWLPHTVFSLLSVFsrrfyyspsFYTISSCVLWLTYLKSVFNPVIYCWRIKKFREAC 338 coelacanth
XP_007883327 269 TILILFIGFSFCWLPYTVYSLLSVFsrkfyysqsFYVISTYILWLSYLKSVFNPIIYCWRIRKFRESC 336 elephant shark

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