Conserved Protein Domain Family
7tmA_OR52R_52L-like

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cd15951: 7tmA_OR52R_52L-like 
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320617
Aligned: 15 rows
Threshold Bit Score: 394.406
Created: 17-Dec-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
Q8NGF1        28 LWIAFPFCATYAVAVVGNITLLHVIRIDHTLHePMYLFLAMLAITDLVLSSSTQPKMLAIFWfhaHEIQyhaCLIQVFFI 107 human
EMP25508      27 HWVAIPLCFMYIVALLGNGIVLFVIRTDPSLHePMYVFLAMLTITDLVLSTSTLPKMLSIFWlgsREIGfhaCLTQLFFI 106 green sea turtle
NP_001000137  38 MWISIPFCMVYILALVGNSSLLFIIKTDSSLHePMYLFLCMLAVADLVVCTTAVPKLLSVFWfhdGEIRfeaCLTQIFLI 117 Norway rat
Q8NGH7        43 HWIALPLGILYLLALVGNVTILFIIWMDPSLHqSMYLFLSMLAAIDLVLASSTAPKALAVLLvhaHEIGyivCLIQMFFI 122 human
NP_001009878  28 FWIAFPFCIMYAIAVLGNIILLIIIKTESSLHePMYLFLAMLAFTDLVLSTSMVPKMLTVFWrgsREIGfvsCLVQLFFV 107 chicken
EMP26211      34 VWISIPFCSVYLLSLLGNGLLLAVTKTEPSLHePMYLFLSTLALADLIISTTTLPKALCIFWfsdRAIHtnsCLAQIFLI 113 green sea turtle
XP_006037349  28 IWLAIPFCCMYLVAVMGNCIILLVIKMERSLHePMYLFLCMLSVTDLVLSSSTLPKMLSIFWfdaREIDfgaCLTQMFFI 107 Chinese alligator
NP_001001023  34 TWLSVPFCLVYLGAHLGNFPLLFIVRIDSNPHePMYFFLCMLSDTDLILSTTAMPKILSNFWfhnREIHfeaCLVQVFLI 113 Norway rat
EMP25418     105 VWISIPFCTMYIIAVLGNFTILFIVKRETSLHgPMYYFLCMLAITDLVLCTSILPKTLSIFWfnsREIDfsaCLTQLYFI 184 green sea turtle
EPQ05756       3 IWISIPFCSMYVVALMGNILILFIIKTEIALHePMFYFLSMLAITDLILSTSTLPKMLVVFWfnyHEINfhaCLTQMFFI 82  Brandt's bat
Feature 1        #  #                                            # #####                         
Q8NGF1       108 HAFSsVESGVLMAMALDCYVAICFPLrHSSILtPSVVIKLGTIVMLRGLLWVSPFCFmvsrMPFCQHqAIPQSYCEHMAV 187 human
EMP25508     107 HASSlVESGILVAMALDRYVAICNPLrHAAILkISMVAKIALLVLVRGLVVIAPLPLllrrLPFCQAyIIPHSYCEHMAV 186 green sea turtle
NP_001000137 118 HSCStMESGFFLAMAFDRYIAICNPLrHSAILtRTLTGGIGLAVVLRGIALLSPHPFllrwLPYCKTnIISHTYCEFMAL 197 Norway rat
Q8NGH7       123 HAFSsMESGVLVAMALDCYVAICHPLhHSTILhPGVIGCIGMVVLVRGLLLLIPFPIllgkLIFCQAtIIGHAYCEHMAV 202 human
NP_001009878 108 HNFTtVESGVLMAMALDRYFAICHPLrHSSILsMPVVAALGSLVLLRGFLMVGPACFllhkKAFCQHrVISHSYCEHMAV 187 chicken
EMP26211     114 HSLAtMESGFMLAMAFDRYIAICNPLqHSAILtHQAIAKIGVGVVMRGAMLLGPHPFllkwLPYCRThVISHTYCEFMAL 193 green sea turtle
XP_006037349 108 HSFTaMESGFFVAMAYDRYVAICNPLrHATILtHSRIAKIGCTVVVRGMVFFSPHPFlvsrLPFCRTnIISHSYCEFMAL 187 Chinese alligator
NP_001001023 114 RSLCsMASGFILAMALDRYVAICNALrHSAIPtHGVIRNLGIMSVVRGGLLFSPQPLmlrwLPYCRTnTIPHTYCEFMAL 193 Norway rat
EMP25418     185 HCFSvIESGIFVAMGFDRYVAICHPLrHSTTLtNPVVAKIGLAMVLRGGMLVMPHPFlarwRPYCRTnIISHTLCEHMAV 264 green sea turtle
EPQ05756      83 HAFSgVESGLLVAMVLDRYVAICNPLrHSSILtNSVVVQVGIVALLRGLVLMTPHPFlvkrWPYCRTnIVPHTYCEHMAV 162 Brandt's bat
Feature 1                  #  ### ### ##                                            #  ## ##  #  
Q8NGF1       188 LKLVCADtsiSRGNGLFVAFSVAGFDMIVIGMSYVMILRAVlqlpsgEARLKAFSTRSSHICVILALYIPALFSFLTYRF 267 human
EMP25508     187 VKLACTDttvNAAYGLVMALLVGGLDGMSITLSYVMILQAVfglpstQARLKALSTCMSHICVILMFYIPGLFSFLVHRF 266 green sea turtle
NP_001000137 198 IKIACAEtsiRRAYSLIVAFLTGGVDFILIICSYVLILNTVfhlpskDARLKTLGTCGSHVCVILVSYTPAFFSFLTHRF 277 Norway rat
Q8NGH7       203 VKLACSEttvNRAYGLTMALLVIGLDVLAIGVSYAHILQAVlkvpgsEARLKAFSTCGSHICVILVFYVPGIFSFLTHRF 282 human
NP_001009878 188 VKLVCEDtrvNAAYGLSVAVAVIGVDLTLIIVSYTMILRVVlklsasDTQLKAFNTCVSHICVILAFYVSGLFTFLTHRF 267 chicken
EMP26211     194 VKLACADttvMRAYGLLVAFLTAGLDFNLIVLSYILILQAVfnlpskDARHKSLSTCGSHICVMLVFYTPAFFSFLSHRF 273 green sea turtle
XP_006037349 188 VKLACVDvavTKEYSLTVASLIGSFDIFFTSLSYALILQTVtrlpskEASLKAFSTCGSHICVILVFYSTAVFTFLTHRF 267 Chinese alligator
NP_001001023 194 IKLACAEtriFRLYSLTAAFLTGSLDFISIICSYIVILYTVfrlpskAARLKTLGTCGSHVCVILVAYTPAFFSFLTHRC 273 Norway rat
EMP25418     265 VKLACSDtriSSYYGLFVVFCVLGLDVFFITMSYTQILRAIfilptkDARLKTFGTCASHLCAILPFYVSTIFSSLTYRF 344 green sea turtle
EPQ05756     163 VKLACADisiNSLYSLAVIILIVGTDVACISLSYIQILRTVfklpskDARLKTLSTCGSHVCVILTFYIPALFSFLTHRF 242 Brandt's bat
Feature 1             ## ###  #  ##                 
Q8NGF1       268 GhdvPRVVHILFANLYLLIPPMLNPIIYGVRTKQI 302 human
EMP25508     267 GqsvPNPIHILLANLYLLVSPMLNPIVYGVKNKQI 301 green sea turtle
NP_001000137 278 GhkvAPQVHIFVANIYLLVPPMVNPIIYGVRTKKI 312 Norway rat
Q8NGH7       283 GhhvPHHVHVLLATWYLLMPPALNPLVYGVKTQQI 317 human
NP_001009878 268 GhsiPQHIHILVADIYLLLPPTLNPIIYGVRTKQL 302 chicken
EMP26211     274 Gh-vAPHVHILIANMYILFPPMMNPIIYGVRTPRI 307 green sea turtle
XP_006037349 268 GhnvAPHIHILIANVYLLVPPMLNPVIYGVRTKRI 302 Chinese alligator
NP_001001023 274 GhnvAPHIHIFVANIYLLVPPLANPMIYGIRTKTI 308 Norway rat
EMP25418     345 GqnvALHFHVLIANVYLLVPPMLNPIIYGVRTKQI 379 green sea turtle
EPQ05756     243 SkhvPRHTHILLANMYLLVPPMLNPVIYGVRTKQI 277 Brandt's bat

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