Conserved Protein Domain Family
7tmA_OR52B-like

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cd15221: 7tmA_OR52B-like 
olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320349
Aligned: 22 rows
Threshold Bit Score: 441.344
Created: 4-Dec-2013
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
Q9H346        28 FWIAIPFCAMYLVALVGNAALILVIAMDNALHaPMYLFLCLLSLTDLALSSTTVPKMLAILWlhaGEISFggCLAQMFCV 107 human
XP_008175891  27 SWISIPFCSMYTIALLGNGXLLFIVIEEQSLHePMDLFLARLAVADVLLSTATMPKTLSISWfnaREIAFsaCFTQMFII 106 western painted...
NP_001000167  27 LWIGISFFIIYLVAFAGNSILLYLILTERSLHePMFFFLSMLAGTDLILCNTCVPKTVSIFWlgpQHITFpgCLTQMFFL 106 Norway rat
Q96RD2        27 IWLSIPLCLIYITAVLGNSILIVVIVMERNLHvPMYFFLSMLAVMDILLSTTTVPKALAIFWlqaHNIAFdaCVTQGFFV 106 human
XP_006752671  27 MWISIPFCLMYLVAVAGNGILIYVVAVERSLHePMYLFLSLLAFWDLILSTSTVPKALSIFWfddMDISFggCVTQLFFM 106 Myotis davidii
EMP25511      27 TWIAIPFSLMYIVALLGNCVLMFLIATERSLQeSMYFFLSMLAVTDLLLSTSTVPKMLAIFWfraKEIAFesCLTQIFFV 106 green sea turtle
Q8NGF0        45 IWLSIPFCIMYITALEGNGILICVILSQAILHePMYIFLSMLASADVLLSTTTMPKALANLWlgySLISFdgCLTQMFFI 124 human
EMP25513     111 IWLSIPFCLTYVVALLGNSVLLFTIITESSLHePMYIFLSMLTVADLLLSSTTVPKTLSVFWslsKEISFkgCLTQMFFI 190 green sea turtle
XP_004920691 125 FFFSIPFCSMYILALAGNLLLIYVIATNTSLHqPMYQFLVMLAMSDILLCTTTVPKSLAIFWfqsSRIPFdgCIAQVFFI 204 western clawed ...
Q8NGJ2        33 VWIGIPFCIIYIVAVVGNCILLYLIVVEHSLHePMFFFLSMLAMTDLILSTAGVPKALSIFWlgaREITFpgCLTQMFFL 112 human
Feature 1        #  #                                            # #####                         
Q9H346       108 HSIYaLESSILLAMAFDRYVAICNPLRYTTILnHAVIGRIGFVGLFRSVAIVSPFIFLlrrLPYCGHRVMTHTYCEHMGI 187 human
XP_008175891 107 HFIFvVESAILLAMAFDRYVAICGPLRYTTILtHSKIGKIAAAAVIRGVCLVGSLTYFlkrLPFCGPNVIYHTFYEHMCI 186 western painted...
NP_001000167 107 HFSFaMDSAILLAMAFDRYVAICFPLRYTTILtHQIVIKIVVVIISRSFCIIFPCVFLlkrLPFCRELVIPHTYCEHIGI 186 Norway rat
Q96RD2       107 HMMFvGESAILLAMAFDRFVAICAPLRYTTVLtWPVVGRIALAVITRSFCIIFPVIFLlkrLPFCLTNIVPHSYCEHIGV 186 human
XP_006752671 107 HFAFvVESGILLAMAFDRYVAICYPLRYTTILsHGVIGKIGGAVVFRGFATVFPIVFLvkrLPFCRTNIIAHTFCEHMGL 186 Myotis davidii
EMP25511     107 HFGFvAESAVLLAMAFDRYVAICDPLRYTTILtNAKTGKIAVAIVIRSFCIIVPVVFLlewLPFCGSNVLPHSYCEHIVV 186 green sea turtle
Q8NGF0       125 HFLF-IHSAVLLAMAFDRYVAICSPLRYVTILtSKVIGKIVTAALSHSFIIMFPSIFLlehLHYCQINIIAHTFCEHMGI 203 human
EMP25513     191 DFIFiTESAILLAMAFDRYIAICDPLRYTTVLtHSVIRKIAMAALTRSFCIMFPAIFLlkrLDYCGHNIMPHTYCEHMGV 270 green sea turtle
XP_004920691 205 HFLFvTESSVLLTMAYDRYVAICYPLAYTTKMtNSFIWRVVIVALTRGFCTTGPFTLLlkrLPYQGSNVIAHSYCEHMAM 284 western clawed ...
Q8NGJ2       113 HYNFvLDSAILMAMAFDHYVAICSPLRYTTILtPKTIIKSAMGISFRSFCIILPDVFLltcLPFCRTRIIPHTYCEHIGV 192 human
Feature 1                  #  ### ### ##                                            #  ## ##  #  
Q9H346       188 ARLACANitvNIVYGLTVALLAMGLDSILIAISYGFILHAVfhlpshDAQHKALSTCGSHIGIILVFYIPAFFSFLTHRF 267 human
XP_008175891 187 AWLAYADitlNIWYGLMVALVTTGLDVVFIAVSYILILQAVfrlqskDARLKALGTCSSHICVILMFYIPAFFSIFAYRF 266 western painted...
NP_001000167 187 ARLACADisiNIWYGFAVPIMTVMSDLILIGISYTVILRTVfnlpsrDARQKALSTCGSHVCVILIFYTPAIFSVLAHRF 266 Norway rat
Q96RD2       187 ARLACADitvNIWYGFSVPIVMVILDVILIAVSYSLILRAVfrlpsqDARHKALSTCGSHLCVILMFYVPSFFTLLTHHF 266 human
XP_006752671 187 AKLACADitiNIWYGISVPLLSVMLDMVTIVVSYGLILRAVfrlpshDARMKALSTCGSHVCVILMFYLPGIFTVIAQRF 266 Myotis davidii
EMP25511     187 ARLACADitvNIWYGFAVPIVTVILDVVLIGVSYALILRAVfrlptkEARLKALSTCGSHVCIIILFYTPALFTVLTHRF 266 green sea turtle
Q8NGF0       204 AHLSCSDisiNVWYGLAAALLSTGLDIMLITVSYIHILQAVfrllsqDARSKALSTCGSHICVILLFYVPALFSVFAYRF 283 human
EMP25513     271 ATLACGDltvNIWYGLAAGFLSAGLDAFFIAVSYASILRSLfrlpyqGIHLKALNTCGSHVCVILMFYTPAFFSWSTHRF 350 green sea turtle
XP_004920691 285 AKLATADilvNVVYGLIIAFGITGIDMILIAVSYVVIIRAVirlpssEARYKAFNTCVSHLCVITLFYVPAFFSFITHRV 364 western clawed ...
Q8NGJ2       193 AQLACADisiNFWYGFCVPIMTVISDVILIAVSYAHILCAVfglpsqDACQKALGTCGSHVCVILMFYTPAFFSILAHRF 272 human
Feature 1              ## ###  #  ##                 
Q9H346       268 GhhevPKHVHIFLANLYVLVPPVLNPILYGARTKEI 303 human
XP_008175891 267 GganiPHCIHVLLANVFVIVPPMLNPIVYGMRTRQI 302 western painted turtle
NP_001000167 267 Ghn-iPHSFHILFANLYVAIPPAINPIIYGVKTKQI 301 Norway rat
Q96RD2       267 Grn-iPQHVHILLANLYVAVPPMLNPIVYGVKTKQI 301 human
XP_006752671 267 Grk-iPKHVHILLANLYVLVPPMMNPVIYGVKTKQI 301 Myotis davidii
EMP25511     267 Ghh-iPRHIPILLADLYVLIPPMLNPIVYGMKTKQI 301 green sea turtle
Q8NGF0       284 GgrsvPCYVHILLASLYVVIPPMLNPVIYGVRTKPI 319 human
EMP25513     351 Grh-iPRHTLILLANLYVVIPPMLNPIIYGEAGICL 385 green sea turtle
XP_004920691 365 GhnviPLYAHILLANLYCLVPPMMNPIIYGVKTKEI 400 western clawed frog
Q8NGJ2       273 Ghn-vSRTFHIMFANLYIVIPPALNPMVYGVKTKQI 307 human

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