Conserved Protein Domain Family
TRA-1_regulated

?
pfam02343: TRA-1_regulated 
TRA-1 regulated protein R03H10.4
This family of proteins represents the protein product of the gene R03H10.4 which is located near a sequence that matches the TRA-1 binding consensus. TRA-1 is a transcription factor which controls sexual differentiation in C.elegans. R03H10.4 shows male-enriched reporter gene expression and acts as a direct target of TRA-1 regulation.
Statistics
?
PSSM-Id: 460535
Aligned: 66 rows
Threshold Bit Score: 91.2432
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
EFO97479      23 TNCSCPDILTLGWWGRstkcflaienpkkiiqgsgNIETyEEGIGCTRKIMCyKLNYDDGLMLDFKETEIP---IPSDKD 99 
XP_003096352 160 SWCECPGLLDKFKGDDn-----------------sSVLY-TEEDGCVINITCkASYNSTFVGFNFTDSEIP---RPADIA 218
EFO87215      21 EVCECPDLLDQLKWPKk-----------------nETLY-TEEAGCFRNITC-QTHEWSWVRFNYNESEVP---RPADTD 78 
XP_003091593  24 VVCECSDIRDLITRDEsen--------------asEPIY-SEGAGCERNVTC-GFDESTYVRIYLHQSEIEfydRPDWGM 87 
EGT49804      23 SDCSCGDLRQLELNGTl------------------NAPY-SEGPGCTRSITC-AKKWQTYVVFYWHNSEID---RPSDAR 79 
XP_003100105  29 DYCECSDIIDLLDEYAdr----------------aNIPM-TEKVGCVRNITC-DADDQTYVTIYFSASEIV---RPDDNN 87 
XP_003100171  29 DYCECSDIIDLLDEYAdr----------------aNIPI-TEKVGCVRNITC-NADINTFAGFYFSASEIV---RPDGNT 87 
XP_003103825 162 PPCECSDIVDLFDDHSdk----------------sKIPV-TDKDGCDKSITCdADEYFTYITISFNGSEIV---RPDDSH 221
EFP09902      29 DYCECSDITDILWKSYgtd--------------eyDILI-SEKGGCVKNITC-HDSVLTYVTTNFSTSEIV---RPDDSH 89 
XP_003096352  20 DQCECPDLLDRLNWPEr-----------------sDILY-TEEAGCFRNITC-LTYKWSWVRFNYNETEIT---RPVNAT 77 
EFO97479     100 PnndwlqapTQDEMYGMVSGLIDVFSYFGIVCENGTWYATKYPHGIVY------ANAGSGFTGPSDEYNGKKSKIDYFRC 173
XP_003096352 219 Dnyg---aaLTVGDQQPNLSDINLFEYFGMICENQEWYITKYPSGVRYg-----NATGVFVIGSNGEFDGKKTKINYFSC 290
EFO87215      79 Ewgaa-etiDTTKPAEPQKSIVNLFEFFGMICENNEWYITKYPYGFSYaqfnetGTYIFLMKNNNGELDGKKSKIWQFAW 157
XP_003091593  88 Gyl-----dSMGSDSEIFGKPVNVFSYFGMVCEDGDWYATKYPFGVYYa----tKENWPNRVGLNGKVDGLKSLIAYIAC 158
EGT49804      80 Ddyg--tadTNNIQNSLDQSATDVFALFGMICENQTWFITKYPFGVSY------YNSDDVSVAIGESLDGKKSEIYDFKC 151
XP_003100105  88 Ndig--yvdSTNLQTGVPRGPLDIFSSFGMSCENKKWYVTKYPFGLSY------EKKDWKLEYITGDWDGKKSEIKFIAC 159
XP_003100171  88 Dnia--yvdSINRQTGVPRGPLDIFSSFGMSCENKKWYVTKYPHGLSY-------YTKDSEEFISGDLDGKKSEIGKIFC 158
XP_003103825 222 Kdnea-yvdSINHQTGEPRGPLDIFSFYGMSCENKKWYVTKYPFGLHYy-----AEDHVEFKHITGDLDGKKSEITKIAC 295
EFP09902      90 Kdtka-yvdSCEIYTGIRKGSIDVFSFFGMTCENNKWYVTKYPFGVHY------ITKDSETKFITEGLDGKRSEIESVSC 162
XP_003096352  78 Ywgva-etiDTTKPAEPQKSIVNLFEFFGMICENNDWYITKYPYGFSYvqsngtGTYVYLMKNNNEELDGKKSKILVWNC 156
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap