Conserved Protein Domain Family
UPF0560

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pfam10577: UPF0560 
Uncharacterized protein family UPF0560
This family of proteins has no known function.
Statistics
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PSSM-Id: 463154
Aligned: 14 rows
Threshold Bit Score: 963.838
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_001333996  29 VTLKVHISDASTHQPIADALIEIFASQVSVASGTSGTDGVAFIKFPYKLGNQLIVTATKQAYVPNSAPWKPIRLP---VF 105
4_pfamImport   1 VTLKVHLSDASTHQPLGGATVQLFTNHTPVTTETSTPDGNAYLRFPYRLGTQLVVTATKQGYVPNSVPWTPSRLP---VF 77 
XP_005810636  39 VTLKVHLSDASTQQPLLGATIQLFANHTSVATETSSADGNTYLRFPYRLGTPLVVTATRQGYVPNSVPWTPSKLP---VF 115
XP_012827003  43 VHIKVQVYENGDLSPLASAAVEIFGNQSALASGVTDQDGIAVLGISYRLGTWVLVTATKRGYVTNSVPWRVDRLPrkhLY 122
A2A699        41 ILIKVQVYVSGELVPLARASVDVFGNRTLLAAGTTDSEGVATLPLSYRLGTWVLVTAARPGFLTNSVPWRVDKLP---LY 117 house mouse
XP_015217836  35 VFIRVQVFDNSDLSPLARAAVEVYGNQSTLASGVAGDDGAVAVRFQYRPGTWVIVTASRQGFVTNSAPWHASRIP---LY 111
XP_684281     35 VLIKVQVFDNSDLSPLRESTVQVCGNQTILASNLVGEDGIVTLTFLYRPGTWVIVTASKHGFVTNSAPWHASRVP---LY 111
XP_001337555  34 VQVRVQVFDGGDLSPLPNAALAVHGNQSLLAQSRAGSDGVQVVSFTYRTGTWVIITASQRDYLTSSVPWHASRLP---LY 110
XP_005992281  37 VLIKVQVFDNSDLSPLFHASVDVYGNQSSLASGITDGDGVVTITFQYRPGTWIIVTAAKYGFVTNSAPWHVDRIP---MY 113 coelacanth
CAG11910       2 VTLKVHLSDASTRQPLSGVTVQLFANHTSVTTETTSADGNTYLRFPYRLGTPSVVVATKRGYVPNSVPWTPSRLP---VF 78  spotted green p...
NP_001333996 106 SSLSLGLLPERSATLMVYEDVVQIVSGFQGARPQPRVHFQRRALRLPENTSYSDLTAFLTAASSPSEVDSFPYLRGLDGN 185
4_pfamImport  78 SSISLDLLPERAATLMVYEDIVEIVSGLQGLRPQPRVDFQRGALTLPSNISYANLTALLTVASSPSHIQYFPHLQVLSGN 157
XP_005810636 116 SSISLDLLPERAATLMVYEDVVEIKSSLQGLRGQPSIHFLRRALSLPADTSFANLTALLTVASSPSRIQHFPHLQVLGSN 195
XP_012827003 123 ASVSLYLVPERPATLILYEDIVQILLGSPGVRSQPWVQFQRKAARLPRSSTYNQLTSSLTTASNLHQMRGFPSFIGTEPE 202
A2A699       118 ASVSLYLLPERPATLILYEDLVHILLGSPGARSQPWVQFQRRAARLPVSSTYSQLWASLTPASTQQEMRAFPAFLGTEAS 197 house mouse
XP_015217836 112 ASVSLYLLPQRPATLILYDDVVQVLLGSPGARNQPWVQFQRKAVRLPLNSTYTELSAVLTSAKSQYEIGGFPYLLGQESN 191
XP_684281    112 ASVSLYLLPQRPATLLLYDDVVQLLLGSPGSRRQPWVQLQRRAIQPPLNNSQITLSAMLTSSRSQYELGGFPYPLAMDNN 191
XP_001337555 111 ASVSLYLMAQKPGTLILYDDVIQVFHGSPSGRSQPWLQVPRRSLQF--NSSYTELTAVLTTAREQNEINSFPYPLALEPN 188
XP_005992281 114 ASVSLYLLPERPATLILYEDVVQILLGSPGSRNQPWVQFQRKAVRLPENSTYSHLSAFLTAASSEYEIGGFPYLVGLESN 193 coelacanth
CAG11910      79 SSVSLDLLPERTATLMVYEEVVEIVSGIQGFRHPPIVNFPRRALTLPFDTSYANLTALLTVAGSPSHIQHFPHLQAVDSN 158 spotted green p...
NP_001333996 186 GT--GNSTRYDLTPVTAVSVHLLSGNGMPVLVDGPIYVTVPLATQ-SSLRHNAYVAAWRFDQKLGTWLKSGLGLVHQEGS 262
4_pfamImport 158 GTa-GTEERFELTPVAAISVHLLAGDGVELQVNGAITVSVPLPAN-SGLKENDHIPAWRFDPRLGAWIKSSWCHVQRDGN 235
XP_005810636 196 ST--GTEKKFELTPVAAISVHLLASDGAELQVNGPITFSVPLPAD-STLRENDHIPAWRFDPRLGAWIKSSSGQVQKVGN 272
XP_012827003 203 SSngGNTSWVELLPVAAVSVHLFTGNGSEVHLSGPVQLSLPLPPE-SGLTTSSSVPAWRYEPKAGLWIRSGMGMVRRDGQ 281
A2A699       198 SS--GNGSWLELIPLAAVSVHLLTGNGTEVPLSGPIHLSLPVPSEpRALAVGTSIPAWRFDPKSGLWVRNGTGVIRKEGR 275 house mouse
XP_015217836 192 GTg-GNGSWLDLTAVAAVSAHLFTRNGTLIQVSDPVHISIPMPSD-SPVRVATSIPAWRFDSKTGVWVRNGTGYIKKEGA 269
XP_684281    192 STg-TNSSWVELTALAAMCAQLTGPNGTEVQVSEPIHISIPLPSD-SPLKTATSVPVWRFEDKTGLWVRSGAGYIKKEDT 269
XP_001337555 189 NTg-GENGWTDLTTIAAVSAQLFDREGRAVEVSEPVHISVPLPSD-THIRSASSIPVWMYDTKTGLWVRNGTGFIIREGS 266
XP_005992281 194 GT--GNSSWLELTPVAAVSVHLFIGNRSEVQLSAPVHVSIPLPGD-SPLLATTNVPAWRFHPKSGIWVRSGTGQIKREGT 270 coelacanth
CAG11910     159 SS--GTEKRLELTPVAAVSVHLLASDGAQLQVNRPITVSLPLPAD-GDLKENDAVPVWRFDPLLGAWLKSGWGHVRREGN 235 spotted green p...
NP_001333996 263 QLTWTYIAPQLGYWVAAMSPPIPGPVMT----QDITTYHTVFLLAILGGMAFILLVLLCLLLYYCRRKCLKPRQHHRKLQ 338
4_pfamImport 236 RLSLTYIAPQLGYWVAAMSPIHSGPVFA----KDISMYHTVFLLAILGGMALILLCLLCLLLYYCRRRCLKPRGSHRKLT 311
XP_005810636 273 QLTLTYLAPQLGYWVAAMSPLNSGPIVA----RDISAYHTMFLLAILGGMAFILLSLLGLLLYYCRRRCLKPRGSHRKFT 348
XP_012827003 282 QLYWSFVSPKLGYWAAAIPSSGRGMLSLms-gvDIAGYHTIFLLSILGALALLVLILLCLLIYYCRRRCLKPRQQHHKLQ 360
A2A699       276 QLYWTFVSPQLGYWVAAMASPTSGLVTItsgiQDIGTYHTIFLLTILAALALLVLILLCLLIYYCRRRCLKPRQQHRKLQ 355 house mouse
XP_015217836 270 QLTWSFVAPQLGYWIAAVPSATGGMALNpsglRDITTYHTIFLLTILGSMALLVLILLCLLLYYCRRRCLKPRQQHRKMH 349
XP_684281    270 QMTWSFVAPKLGYWLAAFPS-TSGSGLNtsglRDITTYHTIFLLAILGAMALLVLILLCLLLYYCRRRCLKPRQHRRKMH 348
XP_001337555 267 QLRWDFTASQLGYWIAAFRA-SSGSGLShpglRDITAYHTFFLLSILGSLALLVLVLLCVLLYYCRRRCLKPRRQQKQVQ 345
XP_005992281 271 QLTWNYVASQLGYWMAALPSSMAGGAMGppglRDITTYHTIFLLTILGALALLVLILLCLLLYYCRRRCLKPRQQHRKLQ 350 coelacanth
CAG11910     236 QLILTYIAPQLGYWLAAMSPIHSGLVFA----KDMNSYHTVFLLAILGGMALILLCLLCLLLYYCRRRCLKPQMSHRKLT 311 spotted green p...
NP_001333996 339 LPPALESSKRDQATSMSHINllfsrrasdypgplsvsshsrpeapgtkeLMGGVHLEMMSPKGEGDLHTP-MLKLSYSTS 417
4_pfamImport 312 LSSGLDGNRRDQATSMSHMNlisekvc---------------vcysctrCTLQVQLELVSTATEPDMTTP-MLNPSSYEH 375
XP_005810636 349 LSAGLDSTKKDQATSMSHMNlis----------------------------neVQLELVSTATEPDMTTP-MLKPSSYEP 399
XP_012827003 361 LSG-LSEPKRDQATSTSHIN-----------------------------LISTSHLDS-SSTADSDLRTP-VLRSAF--- 405
A2A699       356 LSG-PSDNKRDQATSMSQLH-----------------------------LICGGPLEP-TSSGDPEAPPPgSLHSAFSSS 404 house mouse
XP_015217836 350 ISSTLDSSKKDQGTSTSHIN-----------------------------LISSSHIETASSNGDMDANTP-VMKSAFSSS 399
XP_684281    349 LSSTLESSKRDQGTSTSHLN-----------------------------LISGGHMETASSTGDLN-------------- 385
XP_001337555 346 VPSALNGSRKDQGTSTSHLN-----------------------------LICGGHVESAASNGNLDANKS-----EGSPS 391
XP_005992281 351 ISNTLDSSKKDQGTSTSHIN-----------------------------LISSSHIESASSNGDMDVHTP-VLKSTYSNS 400 coelacanth
CAG11910     312 LASSLD--KKDQATSMSHLNlis------------------------------neLELVSTATEADMTTP-MLKPFSYEH 358 spotted green p...
NP_001333996 418 QEFSSREELLSHKEe-DKSQTSFDN----------LTPsgtLGKDYHKSVEIFPLKARKSME-KEDYEAPG-NDDYRGSY 484
4_pfamImport 376 QDNHRQHSLIHHGK---HSRSSLGNshhgs-slgnLTP---RSRDYLHSVETFQLKPALSCGtERGC---------RQSY 439
XP_005810636 400 --TQRQQSLIHLSK---HSRCSLGNnshhgsslgnLTP---RSRDYRQSAETFQLKAALSCGtERGY---------RQSY 462
XP_012827003 406 ----SSREDFCKSGgrSSLQHSADT-----------L------PLRPGSRDEYTLKSARSGDl------LE-CEDLKRGY 457
A2A699       405 RDLASSRDDFFRAKprSASRPAAEP-------------------PGARTVEGAGLKSARSVEgPGGLEPSL--DEYRRGP 463 house mouse
XP_015217836 400 REFQSSREEFFKQIpaQKGRHSKFNtd-------tIT---------RRGVESFQMKVARSAEvP---------------- 447
XP_684281    386 ----SSRDDFFKHGptQRQHNSRTN-------------------ADSKRGESFPLKATRSSNt--GTRDLLlQDDYGKGY 440
XP_001337555 392 HAFKSARDEFTRHIpaHKLRHSSKN------------K---QSKGAQRNPESFPMKVHQSTDtSNLDSNLL-HENYGRNY 455
XP_005992281 401 RDLessreeffkqLpsQKKRYTKAStd-------tLTHrvgAKDEYQRPVESFQLKVARSVDvSGALEPPM-LDDYKQSY 472 coelacanth
CAG11910     359 RDNRREPNIIHHTK---HSRSSLSNnshqgsslgnLTP---RSRDYRQSAETFQLKASLPAAaERGY---------RQSC 423 spotted green p...
NP_001333996 485 NTV-LSqslfEKQDQEGL---------ASAGSKLTIQEHmYHVPL-----SPEKEQL----LDRRPTECM-MSRSVDHLE 544
4_pfamImport 440 TSAcSS----SNPLSVSSnpasvnhvaATHRSGVGIVDCiSPSSPp---rSPSRAEG----CECRAPDYL-LSRSVDHLE 507
XP_005810636 463 TSVcSS----SNQISDALslsnhgqvsATQLSSVGIIDCiSPSSPp---hSPCRGEG----GECRAPDHL-LSRSVDHLE 530
XP_012827003 458 G-------------TGGKgqq------rrRGGRGGVRDP-PPSPPpl--pPPFKHVI----GDSKPPDYL-MTQSADPLS 510
A2A699       464 A-----------------------------GAAAFLHEP--PSPPp---sFD-HYLGhkgaAESKTPDFL-LSQSVDQLA 507 house mouse
XP_015217836 448 NNLaGQq---NVEDKSGEghr----rhVVNDNKAYSQDP--PSPPplpppFE-HYQGh--kVENKPPDFL-ISQSADHLA 514
XP_684281    441 S---------SAEDSDDRkyn----hhNAKDNQGYSSDP--PSPPpllppFAGHYQDl--nRDSKPPEYY--ASAGDHLN 501
XP_001337555 456 S----------SDDKDQDyrr----rhVVNDNRGYTSDP--PSPP----------------LVDKPPEYSqVLQGPDHLA 503
XP_005992281 473 SSMvSQq---TVEDKSTEthr----rhLMNESKSYNQAP--PSPPplpppFE-HYVGh--kMDNKPSDFM-MSQSVDQLA 539 coelacanth
CAG11910     424 TSVcSS----SNlnhg--------qasGTHLSSPGTVDCmSPSSPp---hTPSRGEA----CEGRAPDYL-LSRSVDHLE 483 spotted green p...
NP_001333996 545 RPTS--F-PRPGQLICCSSVDQVN--DSVYRKVLPALVIPAHYMKLPGDHSYVSQPLV-----VPADQQLEIGR-LQAEL 613
4_pfamImport 508 RPSPplL-SRPGQLLCCGSVDLLSggDG-YPRVRPTLVIPAHYMRLPGEHPLSGQALL-----LQTDQQSDLET-IQAEL 579
XP_005810636 531 RPNPqlL-SRPGQLLCCGSVDLLSagEG-YSRVRPTLVIPAHYMRLPGEHPLSGQALL-----LQTDEQSDLET-IQAEL 602
XP_012827003 511 RPTS--L-TQPGQLIFCGSIDHMK--EGGYRHAMPTLVIPAHYVRLSSEENSGGQG----------EDQCESEC-GSTQV 574
A2A699       508 RPPS--L-SQPGQLIFCGSIDHLK--DNVYRNVMPTLVIPAHYVRLGGEAGAAGVG----------DEATPPEG------ 566 house mouse
XP_015217836 515 RPTS--L-SHPGQLIFCGSIDQMK--DNMYRSVMPTLVIPAHYMRLSSDFSGMEHAMGmgldqQQQQHQQEMEG-I--HV 586
XP_684281    502 RPSS--VnTQPGQLIFCHSMEQMK--ESMYHSMVPTLVIPAHYMHLSSDLTAVEQAME-----RQQQLQHDMEG---IQV 569
XP_001337555 504 RPTS--LnTQPGQIIFCSSLDQMK--ENMYRTMVPTLVIPAHYMRFSSEFGGSDQG-------KDGTNQSDRDGqSSQGT 572
XP_005992281 540 RPTS--L-SQPGQLFFCGSIDHMK--ENMYRKVMPTLVIPAHYMRLTTDHYSKDQAVG-----IPPEQQQEMEG-ALGQA 608 coelacanth
CAG11910     484 RPSLqpL-SRPGQLLCCGSVDLLSggDG-YPRVRPTLVIPAHYMRLPGEHPLSGQALL-----LQTEQQSDLET-IQAEL 555 spotted green p...
NP_001333996 614 SNphagifphpSSQIQGQPLSSQAISQQ-------HLQEAGAREWSS-QSASMSESLSIPASLNDA-ALAQMNSEVQLLT 684
4_pfamImport 580 NAsh----------------sQQPLGQTptdcapcPSKPGEAERH------GLSESLSIPAALGETgGLVEINSEDTLWA 637
XP_005810636 603 NAsh----------------sQQPLGPSpsnsapdPNKQGKAEAL------GLSESLSIPTALGET-ALVEINKEDTLLA 659
XP_012827003 575 SHahhf--apqDHAQRQQLLQQGHIYQQgt---pgSVQDQEGKGWGN-HSSQMSGSVTIPVVFNES-TMAQLNGELQALT 647
A2A699       567 SAagparpfpqPDPQRPLMQGHAGAG----------GDSGGGEGWGGgRSAPVSGSVTIPVLFNES-TMAQLNGELQALT 635 house mouse
XP_015217836 587 NLsmphqltpqQQQQMQQQASQQN-------------EDPEGRGWGP-HPS--TGPVRIPVLFNDS-TMNQMNGELQALT 649
XP_684281    570 SMtlp-------rqQNQKQQQQQARADNeeeesgkQADGSSEENWGSdQS---SAPVRIPVLFNDS-TIAQMNGELQAMT 638
XP_001337555 573 SSgiqsqihqgQTPGSGHTDGQQGA----------SPAGSDDSVW---PSSGTPAPVHIPVLFNDS-TISQMNGELQALT 638
XP_005992281 609 GMpmphqfgpqEMHHYQHQHMQHSVQ---------QMEDPEGKGWS-------SQSVAIPVLFNES-TMAQLNGELQALT 671 coelacanth
CAG11910     556 NAsh----------------pQQAPGQTaegcspdPSKHADGEQL------GLSDSPAIPSALGDN-ALVEINREDTLLA 612 spotted green p...
NP_001333996 685 EKALMELgGGKplPHPRAWFVSLDGRSNAHVRHSYIDL-------------------QRAGRNGS--------------- 730
4_pfamImport 638 EKTLMELrGGKplPHPRAWFVSLDGRSNAHIRHSYIDL-------------------QRAGCHGS--------------- 683
XP_005810636 660 EKTLMALrGGKplPHPRAWFVSLDGRSNAHIRHSYIDL-------------------QRAGCQNSsqssgdqqd-----y 715
XP_012827003 648 EKKLLEL-GVK--PHPRAWFVSLDGRSNAQVRHSYIDL-------------------QAGDKTRS--------------- 690
A2A699       636 EKKLLEL-GVK--PHPRAWFVSLDGRSNSQVRHSYIDL-------------------QAGSGGRS--------------- 678 house mouse
XP_015217836 650 EKKLLEL-GVK--PHPRAWFVSLDGRSNSHVRHSYIDL-------------------QGGERVRS--------------- 692
XP_684281    639 EKKLLEL-GVK--PHPRAWFVSLDGRSNSLVRHSYIEL--------------------------S--------------- 674
XP_001337555 639 EKKLLEL-GVK--QHPRAWFISLDGRANAHVRHSYIDVgadhghsgthsgnhsaqstLSAPAGSS--------------- 700
XP_005992281 672 EKKLLEL-GVK--PHPRAWFVSLDGRSNAQVRHSYIDL-------------------QTSEKNRS--------------- 714 coelacanth
CAG11910     613 EKTLMELrGGKplPHPRAWFVSLDGRSNAHIRHSYIDL-------------------QRAGCHGNassageardnggagg 673 spotted green p...
NP_001333996 731 -------NDA----------SLD---SGVD--MNE--PKSARKG-------RGDPlslqqshtplQEHQQ-KDP-RAPDS 777
4_pfamImport 684 -------NDA----------SLD---SGVD--LNE--PRLGRRR-------RDGG----------REEREvDRSkGPALA 722
XP_005810636 716 dssgrhgNDA----------SLD---SGVD--LNE--PRAGRRG-------GDAE----------REERA-SGRkTATPA 760
XP_012827003 691 -------NDA----------SLD---SGVD--VNEikLKPGPEE-------RSGK-----------SQLQ-------PST 723
A2A699       679 -------TDA----------SLD---SGVD--VHE--ARPARRRl-----pREER-----------ERAQl----PAPPP 714 house mouse
XP_015217836 693 -------NDA----------SLD---SGVD--VNE--AKPHRRL-------KEDR-----------ERAG-------PGS 723
XP_684281    675 -------NEAlrppmgacnqTLDqrtEAIP--TNS--GKPSHRKlkedgkvKEGG-----------ERKA--------HG 724
XP_001337555 701 -------KDR----------SID---ASLQdtQHDrkSASGRKT-------KEEHh--------gSSRKG-HGGsSFGGG 744
XP_005992281 715 -------NDA----------SLD---SGVD--VNE--AKPTKKG-------KEER-----------ERHT-------PGN 745 coelacanth
CAG11910     674 ggggrrgKDA----------SLD---SGVD--LNE--PRAGRRG-------RDGD----------REEREiDGSkVAAPA 719 spotted green p...
NP_001333996 778 TACTQLLYLEDMDPSGSECAAT-VCTP--EDSalRCLLEG-------------------SGRRSGgqLPSLQEETtkrts 835
4_pfamImport 723 TAYTQLVYVDDLERGGSEEEESpQCSP--QDSkaGRVLSPeaegqrg-----dqgpgdvEGLQMHeePPSLSSSSpas-- 793
XP_005810636 761 TAYTQLVYVDDLEGGGGVEE---KRSPeaEGGkrGPTLSDkaerkgenqlsglvegktvEDVQILeePPSASPASp---- 833
XP_012827003 724 LTYSKLVFAEEGEQSLSESRTGgGCSP--EDSslTPLLDEgsetclpm----grrgrsrGDSSRS--STSELRRD----- 790
A2A699       715 PAPPRLALSEDTEPSSSESRTg-LCSP--EDNslTPLLDEvvapegraatvprgrgrsrGDSSRS--SASELRRD----- 784 house mouse
XP_015217836 724 MAYSKLAYMDDTEQSSSESRTa-MCSP--EDNslTPLLDEslesrgat---iprkgrsrGNSSRS--SNSEIRRD----- 790
XP_684281    725 KIYSKLPVIE-TPDSSSESHSa-MYSP--EENstAPLLDEtaevskggt--fprkgrsrDNSTRS--SASEVHRD----- 791
XP_001337555 745 KHYSKPAYHDPLDLSGGVSRMg-ASSP--LENplTPLLDDgpeeprgss--mprrgrsrGNSSRS--SNSETQRD----- 812
XP_005992281 746 IAYSKLAYMDDTEQSSSESRTa-VCSP--EENslTPLLDEsvehrati----prrgrsrGNSSRS--SNSEIRRD----- 811 coelacanth
CAG11910     720 AAYTQLVYVDDGDRGGSEEQVPkRESP--QDSktAlaeaq---------------kgdvEGAQTVe-SPSRSSSSsspas 781 spotted green p...
NP_001333996 836 dvplePLASPnqr-----rsaNDEDEDDDDDDDDQGEDKKSPWQKREERPLMAFN 885
4_pfamImport 794 ---ppPLPTPegetfrtghslLSVSPDDDAAQEDGEGEKKSPWQRREERPLLSFN 845
XP_005810636 834 ----pPLPTPeeitfrtdralLSVSPDDDAAHEDG-EEKKSPWQRREERPLLAFN 883
XP_012827003 791 -----SMTSP-----------DEDLNDQSETGDDQ--DKKSPWQKREERPLMVFN 827
A2A699       785 -----SLTSP-----------EDELGAEV---GDEAGDKKSPWQRREERPLMVFN 820 house mouse
XP_015217836 791 -----SMTSP-----------EDEMNDQSGEGDDQGENKKSPWQKREERPLMVFN 829
XP_684281    792 -----SVTSP-----------DDDNDDK----DDDGENKKSPWQKREERPLMVFN 826
XP_001337555 813 -----SVTSP-----------EDDNDL-----DDKEENKKSPWQRIEERPLMVFH 846
XP_005992281 812 -----SMTSP-----------EEEMNDQSEGADDQGENKKSPWQKREERPLMVFN 850 coelacanth
CAG11910     782 ppppps----------pevgarrtdhLTDAVQEDAEEEKKSPWQRREERPLLAFN 826 spotted green pufferfish
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