Conserved Protein Domain Family
SSU72

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COG5211: SSU72 
RNA polymerase II-interacting protein involved in transcription start site selection [Transcription]
Statistics
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PSSM-Id: 227536
Aligned: 3 rows
Threshold Bit Score: 342.217
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1711532    3 SHRNSNLKFCTVCASNNNRSMESHKVLQEAGYNVSSYGTGSAVRLPGLSIDKPNVYSFGTPYNDIYNDLLSQSADRYKSN 82  baker's yeast
19074334   1 ---MPLMKLAVTCAMNQNRSMQTHDLLAKKGIPVKSFGTNPVIKLPGETMDKPNVYNFGVTYQQIYDDLCMKNEDHYRES 77  Encephalitozoon cun...
19114988   1 MAPKTNLQISVICASNQNRSMEAHNVLKNAGYQVDSFGTGSAVRLPGPSIDKPNIYQFGYPYDEIYKELEAQDSRLYTAN 80  fission yeast
1711532   83 GLLQMLDRNRRLKKAPEKWQESTKVFDFVFTCEERCFDAVCEDLMNRGGKLNKIVHVINVDIKDDDENAKIGSKAILELA 162 baker's yeast
19074334  78 GILYLLERNMGVKERPENFFQRSEDFDLVITCEERVFTSIFE-YYADAPSCTQCFFMVNFDIRDTPSDAIAGAQEILEFV 156 Encephalitozoon cun...
19114988  81 GLLKMLDRNRRIKRAPCRWQDQDSIYNIVITCEERCYDAICEDLYRRGETLNRPVYLINVDIKDNHEEASVGGKAILDLV 160 fission yeast
1711532  163 -DMLNDKIEQcekddipFEDCIMDILTEWQSSHSQLPSLYAPSYY 206 baker's yeast
19074334 157 eDVLAKEEER-------LEYAVDSALRRYFE-RKGVMLLFTVVNL 193 Encephalitozoon cuniculi
19114988 161 -NKLTEAQDK-------LEELFPSIMADFQSNHPKLPVLYTIHFF 197 fission yeast
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