3IZS,1VX7


Conserved Protein Domain Family
uL30_euk

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TIGR01310: uL30_euk 
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60S ribosomal protein uL30, eukaryotic form
This model describes the eukaryotic 60S (cytosolic) ribosomal protein uL30 (previously L7) and paralogs that may or may not also be uL30. Human, Drosophila, and Arabidopsis all have both a typical L7 and an L7-related paralog. This family is designated subfamily rather than equivalog to reflect these uncharacterized paralogs. Members of this family average ~ 250 residues in length, somewhat longer than the archaeal L30P/L7E homolog (~ 155 residues) and much longer than the related bacterial/organellar form (~ 60 residues).
Statistics
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PSSM-Id: 273548
Aligned: 11 rows
Threshold Bit Score: 271.542
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3IZS_e    10 ESQLKKSKAQQKTAEQVAAERAARKAANKEKRAIiLERNAAYQKEYETAERNIIQAKR------DAKAAGSYYVEAQHKL 83  Saccharomyces cerev...
P11874    14 ESILKKRATSQKKAVDVAKLGRAQQLRNSRLNSVyFKRAEKYVSEYHKTEREAIRLNR------IAKNSGTFYVPPAAKV 87  Dictyostelium disco...
O01802    12 ETVLKRRKQRADARTKAAQHKVTVAAKNKEKKTQyFKRAEKYVQEYRNAQKEGLRLKR------EAEAKGDFYVPAEHKV 85  Caenorhabditis elegans
P05737    10 ESQLKKSKAQQKTAEQVAAERAARKAANKEKRAIiLERNAAYQKEYETAERNIIQAKR------DAKAAGSYYVEAQHKL 83  Saccharomyces cerev...
P17937    16 EVLLKKRKVNERTRKERVEQAIAKKEAQKKNRKEtFKRAETFINNYRQRERERIRLNR------SAKNKGDIFVPDETKL 89  Schizosaccharomyces...
CAB39016   3 SLRAKKVNKNKELKQAAAKKIKTLKLINKKKRNDlRQRTLRYEEEYESERKKIIELKR------EARKNNCFYREAEKKV 76  malaria parasite P....
BAB25329  15 ENLLKKRKAYQALKATQAKQALLAKRERKGKQFR-FRRLESFVHDSWRQQRDKVRVQR------LEVKPRALEVPDKHPL 87  house mouse
AAF14663  14 EIVLKKRKNRDELAFIRKKQLELGNSGKKKKKVSdIKRPEDFVHEFRAKEVDMIRMKQ------RVKRPKSSPPPVKSDL 87  thale cress
AAF53155  18 VLKHRKRRILQDESVVTQKRNDRIKKRTATKNHHkFRRAESFVMGYLKAERTSKRIKQtilrtnVTEQSAKAADDSNPKL 97  Drosophila melanoga...
AAK39754  10 DLIVKKKNREKNLTDYLLLEKKIKKKNNIFKKKK-KIRIENIIKEYIDSSKKRIRIQK------LARKEGKIYINKGPRI 82  Guillardia theta
1VX7_5    19 SLRAKKVNKNKELKQAAAKKIKTLKLINKKKRNDlRQRTLRYEEEYESERKKIIELKR------EARKNNCFYREAEKKV 92  Plasmodium falcipar...
3IZS_e    84 VFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQ---- 159 Saccharomyces cerev...
P11874    88 AFVIRIRGINGVSPKPRKVLKLLRLLQLNNGVFVKLNKASINMLKLVEPYVAYGFPNLKSIKELIYKRGHLKIDGQ---- 163 Dictyostelium disco...
O01802    86 AFVVRIRGINQLHPKPRKALQILRLRQINNGVFVKLNKATLPLLRIIEPYVAWGYPNNKTIHDLLYKRGYAKVDGN---- 161 Caenorhabditis elegans
P05737    84 VFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQ---- 159 Saccharomyces cerev...
P17937    90 LFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIYKRGFGKINGQ---- 165 Schizosaccharomyces...
CAB39016  77 VFVIRLKGVNKLPPKVRSVFRLLRLLQVHNGVFVKVNKATKEMLKIVEPYVTYGYPTLSTVRKLLYKRGYVRVGKV---- 152 malaria parasite P....
BAB25329  88 AFVIRMERIEGVSLLVKSTIMKLGLKKLFSGVFVKVTPQSVRMLRTVEPYVTWGFPNLKSVRELILKRGQAKINNK---- 163 house mouse
AAF14663  88 VFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGN---- 163 thale cress
AAF53155  98 LFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGK---- 173 Drosophila melanoga...
AAK39754  83 LFVIRTKGINGIDPKSKKILKLLRLNNVHAGVFLKINKSILKILQYIEPYVAYGYPSIKNVRSLIMKKGFLKLGSR---- 158 Guillardia theta
1VX7_5    93 VFVIRLKGVNKLPPKVRSVFRLLRLLQVHNGVFVKVNKATKEMLKIVEPYVTYGYPTLSTVRKLLYKRGYVRVGKVrrya 172 Plasmodium falcipar...
3IZS_e   160 R----VPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANNFLWPFKLSNPSGGWGVprKFKHFIQ--G--GSFGN 231 Saccharomyces cerev...
P11874   164 R----IPLTSNDMVEKQLGKFGIICVEDIIHEITTCGKHFKQVNNSLWPFKLNCPRGGFNM--KKTPFLQ--G--GDAGN 233 Dictyostelium disco...
O01802   162 R----VPITDNTIVEQSLGKFNIICLEDLAHEIATVGPHFKEATNFLWPFKLNNPTGGWTK--KTNHFVE--G--GDFGN 231 Caenorhabditis elegans
P05737   160 R----VPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANNFLWPFKLSNPSGGWGVprKFKHFIQ--G--GSFGN 231 Saccharomyces cerev...
P17937   166 R----IALSDNALIEEALGKYDVISIEDIIHEIYNVGSHFKEVTKFLWPFTLT-PVKHSLMekKVKHFNE--G--RKAGY 236 Schizosaccharomyces...
CAB39016 153 RryarKKIQDNADISKHLGKYNVHGIEDMVYQLYTCGPVFKKVNNFLWAFKLKPPRKGFKA--KRHAFNE--PrpGDWGN 228 malaria parasite P....
BAB25329 164 T----VPLTDNTVIEEHLGRFGVICLEDLIHEIAFPGKHFQEVSSFLCPFLLS--VARHATrnRVGFRKE--M--GSPGY 233 house mouse
AAF14663 164 P----VPLTDNNIIEQALGEHKILGIEDLVNEIARVGDHFREVMRFLGPLKLNKPVADVLHrkKQVFS-E--G--GDTGN 234 thale cress
AAF53155 174 K----TAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPNFAAVNEFLCAFTLSSPSNGWQKk-VSVSYKR--G--GEYGD 244 Drosophila melanoga...
AAK39754 159 GhynkISIANDVLIEQRFKKIGISCTEDLVKEIYECGPYFKFTNNLLWPFQLRSPKKGFGKkgKKKSVIE--K--GVFGN 234 Guillardia theta
1VX7_5   173 R----KKIQDNADISKHLGKYNVHGIEDMVYQLYTCGPVFKKVNNFLWAFKLKPPRKGFKA--KRHAFNEprP--GDWGN 244 Plasmodium falcipar...
3IZS_e   232 REEFINKLVKSMN 244 Saccharomyces cerevisiae S288c
P11874   234 REHLINNLIHRMN 246 Dictyostelium discoideum
O01802   232 REDQINNLLRKMV 244 Caenorhabditis elegans
P05737   232 REEFINKLVKSMN 244 Saccharomyces cerevisiae S288c
P17937   237 CGEEINELIKKQV 249 Schizosaccharomyces pombe 972h-
CAB39016 229 REAHINELINRMI 241 malaria parasite P. falciparum
BAB25329 234 RGDRINQLIRQLN 246 house mouse
AAF14663 235 REDKINDLISKMN 247 thale cress
AAF53155 245 RGTAINELIARCL 257 Drosophila melanogaster
AAK39754 235 WEYSINFLIEKMI 247 Guillardia theta
1VX7_5   245 REAHINELINRMI 257 Plasmodium falciparum 3D7
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