7P2P


Conserved Protein Domain Family
SPC12

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pfam06645: SPC12 
Microsomal signal peptidase 12 kDa subunit (SPC12)
This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).
Statistics
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PSSM-Id: 461973
Aligned: 133 rows
Threshold Bit Score: 56.3668
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7P2P_D        80 MDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPPWPIYRRHPLKWLPVQE 150
XP_001705052   1 MDYRGQIRAGHLMRLIIILFALFGLLTAWAFKNMGIGLLVHAFGLCLAALATVPDWPYYNQMEIAWQPVRG 71 
EDS89400      11 IDFVGQRIVNKNISTLIPIITILGFIIGFITQNVFVMLSIYGIGLAFCLLAFGLPMPYLRANYIEWQKVGT 81 
XP_001306765   2 VDFQGQSFIFWTSAALLTLSVPIAIIYAFIVDNYLKGLMVIVYLSAGLFIAFVPNWPWLNRNKPNWQPDTA 72 
ESS29576      22 VDFKGQERVYSWLIYFAWAGGLSGFFVGGILEDFTVTVYTILMCMAIAAILCFPSWPCFHRHPVEWTPHDP 92 
CDU21184      23 MDFQGQKLAFLIKNIIFTISTIVSIAIGYYKQNLALSTYIILVGTALSIILIIPTWPIYNRHPIRWGEPSL 93 
Q8ILC7        23 MDYCGQNLAYTIRNIIFGISTIISIIVGYYSQSLALSTYIILGGTALASILILPTWPMYNRNNIEWEKSYS 93  Plasmodium falciparum 3D7
XP_002260676  23 MDFHGQKLAFLIKNIIFTISTVVSIAVGYYKEDLALSAYIILAGTVLSALLIMPTWPIYNKNNIHWESANE 93 
A0DCS0        20 MDFESQLFVKKIYKIIILTVAIISFIIAFFLERFSVCVYSTIGSSVLCILVLAPAWPMWKKNQPNWQQANQ 90  Paramecium tetraurelia
EIM22070      13 IDYVGQLKAERLQKIIISATTLISFISGWITSRIEVTAVVYLSGCVIAAIVIGPAWSCYNRNTVQWNDKER 83 
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