Conserved Protein Domain Family
SP24

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pfam16504: SP24 
Putative virion membrane protein of plant and insect virus
SP24, or structural protein of 24kD, is a family of putative virion membrane proteins of plant and insect viruses. These viruses are ssRNA positive-strand viruses, with no DNA stage. The family corresponds to the central region of the ORF3 of insect chroparaviruses and negeviruses and plant cileviruses, higreviruses and blunerviruses. It contains four transmembrane regions. Chronic bee paralysis virus (CBPV) is one of the more common member virions. SP24 is probably one of the major structural components of the virions.
Statistics
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PSSM-Id: 465148
Aligned: 44 rows
Threshold Bit Score: 58.0197
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
YP_009342334  52 LKDAI---ILCYYNLTTSPTLLSVYIFVWVISTAEILNIKKGPLEQWLDYLMTnka---twtLGVWINSLQLWIIRICIA 125
YP_009337717  27 IISDV---LGAYKRLPMYPFPMFVLMLTLIVGLAEIYNGGEKPLEYLLNGIQAdlnneniptWEKTALKICKYVLEFIIA 103
APG77525      12 FFDDL---LKVFLRVFANPVTLILFVVGTLEFISLLTESKRNVYEFLIQNFQEllad-nppkFLISVINSFINLFKYFLI 87 
APG77751      57 YLETI---LASCQENISNPFRLALFILGACFVVAWAINAS-SPGHQVVQHLRGr--------LSETHATKVKTITDFLTT 124
APG77683       1 MVSTLfviKSVVKQLIANPLYLLSFSIWILFVIAEFEIIETHPIDWLDNTVNE----------TTSAGATVLRVNNFIEQ 70 
YP_009337660  20 FLDSL---LVVLLRVVAHPVSLVLAVFLVLFVAAEVLE-TTGPLESLDKLIKQelgskdinsLEKFLLKGFDKCIVFVIL 95 
APG77624      17 FFQSC---FDSYSVLVDSPFIFFLFIVAFFTLVAEINN-SYGPLELFSNALVEyck---edkSFKSIALLMLSIVTIVIK 89 
ASA47363      22 IFTGL---FEGYYRIIRNPLALSFFIIGILGVFTLQNATD-GPLELIIKIIKEfdek-khseFLASIVKILIKLSDFLLK 96 
APG77853      38 FFSSV---FNSFYNIIYHFWGLLLAIFGVLTLLSEYGTTT-GPLEMLLKAIMKflsdpdvpvVFKSVASALAWLLGYLIK 113
ASA47513      36 FFQAT---LSCYANIVYHPIAMYMLALAIMFALSEHHGTD-GPLEVIKNIFVKfadddkepdALRKIAKYMITVFTHLIT 111
YP_009342334 126 NKFAFLCLVNFSLPYLYK--PSNKNLl-FTLGFSFLGTFMLAKTPLEIVVMGQMWFLYTQMRSPAQR-F-LITGVAAVTF 200
YP_009337717 104 HKIKVFGFLMISIPVIIR--PSKNNVy-IWVLLVAILIMMRNWGFFEYIVIGNLFYIYTQLLSLTNK-F-LIAMLIVVVV 178
APG77525      88 HRRFFLPVYFILIPLILQ----EREFl-TSLCLLLVITVFRSLSVLQIFCICIVWISYNSF-SQYHR-FvLVFLICLFLY 160
APG77751     125 NHVRFFASGVMLIPFSLL--YARQKWltWALAFLLVIWVAPTYSEWQYVVISLLLFAYYAQKTKENRqTaLVILLVGFVA 202
APG77683      71 NIHKFIICTGLFMNIYFSkqSGKIVLinWILILFLFLIKLNLKIYIRGITFIIGEFFYCSIRSEEYK-FyIILIVALIIY 149
YP_009337660  96 YKTKVVATLAYSIFVALN--PTKLRWs-VFGAAVLIVVAIPSLPVFYHIITAVALVFYLALQRIEHK------ALTVFIY 166
APG77624      90 YKTSVLLSLLFIIPALLD--SSLSTW--LLSFFFVFVSFISSLDAYRLFLFSQFYYMYVFVDNHFYK-A-LLLFVSFIVF 163
ASA47363      97 YKEEFYLILLLLPIPIIY----TGNSvaFTTLFLIVFTFIYHKHVGTVALVIQSVFLYYSLDNLVNK---VITIFVFVYL 169
APG77853     114 YKYMVAYSAILFVPAIVK--PSTRNI--LFSGLLVFLAFLHYITILQVLLLALLFYLFVMLRTPAHK-F-FILFLVIMVF 187
ASA47513     112 YKDKYATLIFISVAPIAK--PSTRNI--IFASLITISLILGSFTLLEMFIFSQLFYLHVMYRNPTYK-LlAVFAMVGLFF 186
YP_009342334 201 ilpstgILEY 210
YP_009337717 179 ------LWNF 182
APG77525     161 ------FDMF 164
APG77751     203 ------IHFV 206
APG77683     150 ------FEGE 153
YP_009337660 167 ------VAGM 170
APG77624     164 ------LLGY 167
ASA47363     170 ------VLGQ 173
APG77853     188 ------GAGF 191
ASA47513     187 ------LDNF 190
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