Conserved Protein Domain Family
Apo-CIII

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pfam05778: Apo-CIII 
Apolipoprotein CIII (Apo-CIII)
This family consists of several mammalian apolipoprotein CIII (Apo-CIII) sequences. Apolipoprotein C-III is a 79-residue glycoprotein. It is synthesized in the intestine and liver as part of the very low density lipoprotein (VLDL) and the high density lipoprotein (HDL) particles. Owing to its positive correlation with plasma triglyceride (Tg) levels, Apo-CIII is suggested to play a role in Tg metabolism and is therefore of interest regarding atherosclerosis. However, unlike other apolipoproteins such as Apo-AI, Apo E or CII for which many naturally occurring mutations are known, the structure-function relationships of apo C-III remains a subject of debate. One possibility is that apo C-III inhibits lipoprotein lipase (LPL) activity, as shown by in vitro experiments. Another suggestion, is that elevated levels of Apo-CIII displace other apolipoproteins at the lipoprotein surface, modifying their clearance from plasma.
Statistics
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PSSM-Id: 461737
Aligned: 15 rows
Threshold Bit Score: 94.1035
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P27917        22 EAEDTSLLD----KMQDYVKQATRTAQDALT-SVKESEVAQQARGWVTDSISSLKDYWSTFKGKFT--DFWDYTPK 90  pig
P19035        22 KAEEGSLLD----KMQGYVKEATKTAKDALS-SVQESQVAQQARDWMTESFSSLKDYWSSFKGKFT--DFWESATS 90  cattle
NP_001003369  22 EEEDPSLLG----LMQGYMQHATKTAQDTLT-SVQESQVAQRARGWMTDSFSSLKDYWSTFKGKFT--GFWDSASE 90 
XP_019666881  22 EGEDPSLLG----LMQGYVQHATKTAQDTLT-TVREFPVAQQARAWVTGRFTSLKDYWSTLTGKFS--GFWDSTFA 90 
P33622        22 EVEGSLLLG----SVQGYMEQASKTVQDALS-SVQESDIAVVARGWMDNHFRFLKGYWSKFTDKFT--GFWDSNPE 90  house mouse
G5BQH4        22 ETEDASLLGymqdYMQGYMEHASKTAQDALT-RVQDSQMAQQARGWMSDSLSSLQDYWSSFKGKWSgfGFWDATPE 96  naked mole-rat
Q9Z2R5        22 EIQESSLLG----VMKDYMQQASKTANEMLT-KVQESQVAENAREWMTESLDSMKGYWTSLIGRLS--GFLDSTPS 90  domestic guinea pig
XP_002708417  25 DPKDASLLS----VMQGYVQHATKTAHDALS-SMQESQMAQQARGWVDAGISSLKGYLSTFAdkfsgfwdlspeas 95 
XP_023600078  22 EADEDSLLK----LMQDYVQQA----QEALTsSVKDLSMAQEASKWMSNGFNSLKDYWSSLTVPLS--NLWPLAPG 87 
XP_031817164  24 EEEEETILN----RVHDYMQQAARQAQEALT-TVQESQMAQQAKGWMADSFSSLHEYWSTWADKLS--VLWDTAEK 92 
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