1Z1W,4FYQ,2YD0,4KX7,3SE6,4P8Q,3Q7J,4WZ9


Conserved Protein Domain Family
M1_APN-Q_like

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cd09601: M1_APN-Q_like 
Click on image for an interactive view with Cn3D
Peptidase M1 aminopeptidase N catalytic domain family which includes aminopeptidase N (APN), aminopeptidase Q (APQ), tricorn interacting factor F3, and endoplasmic reticulum aminopeptidase 1 (ERAP1)
This M1 peptidase family includes eukaryotic and bacterial members: the catalytic domains of aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease, preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1, also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP), or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.
Statistics
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PSSM-Id: 341064
Aligned: 670 rows
Threshold Bit Score: 277.539
Created: 14-Sep-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteactive site
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:H H EClick to see conserved feature residue pattern help
Evidence:
  • Structure:1Z1W: Thermoplasma acidophilum tricorn interacting factor F3 bound to Zn ion
  • Structure:2YD0: Human ERAP1 binds Zn
  • Comment:the zinc ion is tetrahedrally co-ordinated by three amino acid ligands and a water molecule

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                      
1Z1W_A       4 EKYDLTLDfdiq---------krtFNGTETITADa---------------GDIVLDAv---------------------- 37   Thermoplasma aci...
EFX87928    43 IHYRLTLLpile--------dnsrLCGHVWIDVKars-----------etNIILLHSs---------------------- 81   common water flea
JAN42033    75 IHYQLTLLpvie--------enprLCGHVWIDVTvns-----------ptNAIVLHGq---------------------- 113  Daphnia magna
CDK26009    12 EKYTLDLKiqgd---------rpnFHGHCAIDLVpggn---------tasQKFQLHAt---------------------- 51   Kuraishia capsul...
ODQ45220    12 KQYSVSLAlndt---------kpnYSGNVSIELVkndkfhg--dgdtadyFSVSLNT----------------------- 57   Pichia membranif...
EEN44873   121 YNYKVKLRldls---------ettFTGSTTINLRclq-----------atQVIVLDCie--------------------- 159  Florida lancelet
EPB71550   139 IWYNLTLKtylpgvsaianeknltTDGNIMIKLRvls-----------atDEITLNAkdltfpmdytkariltdevptkf 207  Ancylostoma ceyl...
ESW97509    30 TNYDLSLDiss----------kanYMGLVVMDLApneras----vsgsdpFQLVLNAv---------------------- 73   Ogataea parapoly...
CDJ96941   205 VWYNGTLKmylpgyvelpegknftTDGNIMIRLAvkk-----------ptDEIVLNAkdl-------------------- 253  barber pole worm
ODV85285    26 DSYDLSFEinpv---------kpnYTGISIMKLIqnqrftnddttddnenFNFTLNSv---------------------- 74   Candida arabinof...
Feature 1                                                                                      
1Z1W_A      38 --------------------------------------gLQINWMKVNgrdtaf-------------------------- 53   Thermoplasma aci...
EFX87928    82 --------------------------------------eLKILKTIVLplspdvneratqyrseddvavenlcfn----- 118  common water flea
JAN42033   114 --------------------------------------vLPVESVVYAdsevidnevsrmlvermcfsgvldaldslsd- 154  Daphnia magna
CDK26009    52 --------------------------------------kLIVTKAVLFeggnevaq------------------------ 69   Kuraishia capsul...
ODQ45220    58 ---------------------------------------VEVVSVSAVlrcgdkawkllpt------------------- 79   Pichia membranif...
EEN44873   160 -------------------------------------gnITNASVSVVdlttadvqvviell------------------ 184  Florida lancelet
EPB71550   208 kreatndtsddqtpeelthlmtnmtnmttttpapvsqpaLQMHDAKVKrif----------------------------- 258  Ancylostoma ceyl...
ESW97509    74 --------------------------------------eIVVTDAYLLtdtqhklkveqnrk------------------ 97   Ogataea parapoly...
CDJ96941   254 ------------------------------------tfpTDVNKVKILterpasrarrqtmvdspemknstedgmanstr 297  barber pole worm
ODV85285    75 --------------------------------------eLISTDSYLHvdsqvyklkmipdkk----------------- 99   Candida arabinof...
Feature 1                                                                                      
1Z1W_A      54 -------------------------------------------------------tydgqTVRAPgd--------sqPQK 70   Thermoplasma aci...
EFX87928   119 ---------------------------------savyhdsamdhsnialdhhldgqkqylSIVLGeplk-----kgaYYR 160  common water flea
JAN42033   155 ------------------------------dkpksrddkdiaqsvhldedseqmiiilkeELIVGa-----------FYR 193  Daphnia magna
CDK26009    70 ----------------------------------------------------ikptrgsdSVSFEfpqet---snsrSLR 94   Kuraishia capsul...
ODQ45220    80 -----------------------------------------------lnktaesteysckELPLRqla------dtaCLT 106  Pichia membranif...
EEN44873   185 ----------------------------------------------yddsegrlvvylgkRLQEGr----------iYKL 208  Florida lancelet
EPB71550   259 ---------------------------------------------------------ynaTLEKVvlfldnallsleEVI 281  Ancylostoma ceyl...
ESW97509    98 -----------------------------------------------tetvkfstdvtfdSLKSQ------------QLR 118  Ogataea parapoly...
CDJ96941   298 eklknttgtsggipidemeivedepvespvkrlmlveggpkvkkilynsslekvfftldsPLEAGt-----------SVV 366  barber pole worm
ODV85285   100 ----------------------------------------------tetlkfttdnlkfkDLSSDs-----------NLT 122  Candida arabinof...
Feature 1                                                                                      
1Z1W_A      71 IEISFAGKVSDSl------SGIYYAGRen---------gMITTHFEAtDARRMFPCVDHPayKAVFAITVVIdk-dYDAI 134  Thermoplasma aci...
EFX87928   161 IGLLFTGNIYEDn------TGFFRAKYevggetdcckrtVAATQLEAiQARKMFPCIDEPdkKATFQLTVGHff-aLKAI 233  common water flea
JAN42033   194 IGILYLAEINDGd-----nIGFFRVQKkqednnccrqrwIGSTQLEAtHARKVFPCFDEPafKATIELTLGHds-kLRAI 267  Daphnia magna
CDK26009    95 LELDYLAVQTKVssmatptTGVFKSSSg-----------IWATHCQPgWASSVFPCVDEPvcRAKIQLTITTddpeYTCI 163  Kuraishia capsul...
ODQ45220   107 LEIRFIAVVRKImtysdvtKGVFSTKYtdpstg-ksdlfLLSTHSQPhFARCIFPCLDDVncKCPIQLELTAdn-rFSCI 184  Pichia membranif...
EEN44873   209 EIAEFTGELRTQp------PGLYTTDYrhsd----glrqLLVSSLKPmGARYVFPCMDDPamKATFDVTIEHpk-gQTAL 277  Florida lancelet
EPB71550   282 VQLPFSGRITENs------DGLHHSTYrtrtg---dkkiLSFTNLRPgSTRSIYPSLDEPqfKAPLSLTIIHpk-gTVAR 351  Ancylostoma ceyl...
ESW97509   119 LRVHFIGVVRGIasmrdftKGVFKTKYkdga----ndryIISTHCQPsFARLIFPCVDDVlvKTSFKLSLTAde-kFTCV 193  Ogataea parapoly...
CDJ96941   367 LQLPFSGRIPDNl------TGIFFSSYkkvdg---dsslLAVMDCQPaSARKLFPSFDEPsfVAPLTLTILHpn-gTTAR 436  barber pole worm
ODV85285   123 LRVHFLGVVRPAvsirdftRGVFKCRYkdpktn-lnaydIISTHSQPcFSRLIFPCLDDLliKVPIKLALTTek-kYTCI 200  Candida arabinof...
Feature 1                                                                                      
1Z1W_A     135 SNmp----pKRIEVse-----rKVVEFQDTPrMSTYLLYVGIg-KFRYEYEkyr------didLILAslk----diRSKY 194  Thermoplasma aci...
EFX87928   234 NNm-----pLKSSApmatvehwVWDTFETTPaMSTYLVACVLt-EFGHVETvyhsis-gkdvpIRLWthrh--rlaHLDF 304  common water flea
JAN42033   268 SNmp----sNSSTSlktv-ddwVWTTFEKTPvMSTYLLACVIs-ELEYLETsylsin-grnitIRLWtekq--kfsQLDL 338  Daphnia magna
CDK26009   164 ANmpladtkVSQES--------CSFVFQESLpMPTHLFAFVLg-KLQMLTKkag------ditVNVYaen----tkGLEC 224  Kuraishia capsul...
ODQ45220   185 SNm-----pVESSEylse-tsnKLVRFAQSPpMSTSVFSFAVg-NFDFLEQtvrmpvskcdfpIRVYtmvg--esqRAQY 255  Pichia membranif...
EEN44873   278 SNmp----sKTKTVltd---gwVREEFYRTPkMSTHLLGFALfdGLTSLEAvisr-----grvVRVWapfdpeenpSVEV 345  Florida lancelet
EPB71550   352 ASam---ekLDSLPtee--plwDRTSFEVTPaLSTSRTGFTVs-DFENKESatkt-----gmkVRIYsrpe--ainSTTF 418  Ancylostoma ceyl...
ESW97509   194 SNt-----pIESATkid--qgrQLVIFEASPkMTTSVFSFAVg-EFDFLEEkidlse-qknfpLRVYtqig--esgRAKL 262  Ogataea parapoly...
CDJ96941   437 GNam----eITDAEptsd-plwVKTSLDVARsLPTSSTGFTLt-NFDKAQTttdt-----gtkIRVYarpe--ainLTGY 503  barber pole worm
ODV85285   201 SNt-----kIETEEiln--dgrKLVVFEKTPkMTTSIFSFSVg-DFEFIEKfvdlkn-fknfpIKIYtqig--dsnRGEF 269  Candida arabinof...
Feature 1                                                                                  #   
1Z1W_A     195 PLDMARKSVEFYEnYFGIPYALPKMHLISVPef-gAGAMENWGAITFREIYMDiaensa-----vtvkrnSANVIAHEIA 268  Thermoplasma aci...
EFX87928   305 ALNLIPKALERLEdYTGIPYSLPKLDVIALPgyeeGKAMENWGLIIHSEMNLLvdettd-----sidksiVAATIVHELA 379  common water flea
JAN42033   339 AYRLVPTIMKTLEdYFGIPYTLPKLDMVSLPgydlARAMENWGLIVQSESTLLqesdand----pmekaiFAITIVHEIA 414  Daphnia magna
CDK26009   225 VLSTASAATTRIGdLLNVEYPIPKIDIVALPfl-sDGAMENWSLITVAGQHLIytsgdads--kwnssksVREIVVHELV 301  Kuraishia capsul...
ODQ45220   256 ALSTVAAAVGVLEqKFNVKYPLPKLDIVALPfl-sDGGVENWSMIQVINDHILlpdwkvtdahlakihrtIRDVLVHEIV 334  Pichia membranif...
EEN44873   346 ALNTTIDAIHNIEqLVPVEYQLTKTDVIPVPgl-sVPSSDYCGLLMIRETALFcdgqess----msqqlkCELAISKAVA 420  Florida lancelet
EPB71550   419 ALDTAVKALDLLQeYFGVPLKGDKQDIFAVPtl-dDTSMSGQGIMFLPEQDLLldpstnt----aeqrvkIARAVTRALT 493  Ancylostoma ceyl...
ESW97509   263 ALATVKSTLPKLVqKFGVEYPIAKFDVIALPil-sDGGVENWSMIQILKDHLLtpdsaspa-emlkiismIKNVLVHEMV 340  Ogataea parapoly...
CDJ96941   504 ALDTSVKAFEFLQkYLAVPPRSTKLDVFALPel-sKEAMCGDGLILVREDRLLydpqvds----ietkvqVAQTICHEFT 578  barber pole worm
ODV85285   270 ALNISSQILPLLEsKFNVDYPLSKLDFIALPfl-tDGGVENWSMIQILNDHILtpdiddpl-kiisitnmIKNVLVHEMI 347  Candida arabinof...
Feature 1      #                  #                                                            
1Z1W_A     269 HQWFGDLVTMKWWnDLWLNESFATFMSYKTMdt-lfPEWSf---wGDFFvSRTSGALRSDs------LKNTHPIevdvrd 338  Thermoplasma aci...
EFX87928   380 HQWIGNLVSATSWdDIWLNEGLTTLMESFILeq-vaSDLEh----ESVMlVFLQEVMRSDl------LSTQFPLsapass 448  common water flea
JAN42033   415 HQWFGNLVTSRWWsDIWFNEGLATLFENIVLne-iaPELGv----DVITvLFFQQALFHDt------LNISIPLnypvel 483  Daphnia magna
CDK26009   302 HQWLGDLCSFKSWdNTWFNESFATWMGIRVL-----ESMDqtglwQTHLdHDLVQLLQIDs------HVQNSPVignhqt 370  Kuraishia capsul...
ODQ45220   335 HMYVGNYVSFDSYdHTWMNESFATFMSNTIIn----SVFDnt-twFNFLnSDLQQLKVRNm------SADSAPIftanva 403  Pichia membranif...
EEN44873   421 HNWFGNSVTVEWWdDLWLTEALSTMLAYESVay-qrPDVNi---cDLQWdEMIQPAMAADifsrvdlSSYGHAAai---- 492  Florida lancelet
EPB71550   494 RQWFGNLVAPSDWhALWLNEAFAKYMEYTLLdkifaGDVDa---kSYQTgDSVEPVLVDDa------RSSSHPLtlniet 564  Ancylostoma ceyl...
ESW97509   341 HMFMGDLVTFESYdYTWLNEAFATFMSNTILn----EESDd---nQVWFdQLANDGFNMKry---qgLDNMKPIhtenvp 410  Ogataea parapoly...
CDJ96941   579 KQWFGNVMGDSDLkALWLNEAMAKYMEYICVen-ifAGLDk---nSLQTvDSMEQALLDDa------RSSSHPMsievvs 648  barber pole worm
ODV85285   348 HMFMGNLVTFESYdYTWLNESFATFMANCLLde-leINSNv---wLDQCnNELFNMKRYQg------LESMKPIftknvr 417  Candida arabinof...
Feature 1                                                                                      
1Z1W_A     339 p---deisqiFDEISYGKGASILRMIEDy----------aGYEEFRKGISKYLNDHKfgn--aeGSDLWTAIEDVsg--- 400  Thermoplasma aci...
EFX87928   449 y---ptadekFDVISYAKGAAIFRMARSf----------vGPEAFQSAIRRYLTKLQfss--anSTDMWNMINQEarrth 513  common water flea
JAN42033   484 l---ptiehkFDGFAYAKASVIFRMVKSf----------vGDEAFKNGLHRYFNQFQfka--anSTDFWAILTQEsrrac 548  Daphnia magna
CDK26009   371 ndspsyigetFDPKTYSKGIYLLEMLSSf----------vGFETFCGYVGEFISKNKcms--isTLDFWLFLKEKta--- 435  Kuraishia capsul...
ODQ45220   404 t---srihdtFSRNSYEKGIFVMRSLASlfvenddqlnqqNYDVFFGMVGDFIKKNEfgn--fkPVDLWNFLKAHksnr- 477  Pichia membranif...
EEN44873   493 ---------gEDPAVGGKGIGLLRMLDTi----------iSDKEFLKAIENVLARFShdn--mnRSQFWDAVSEAtgf-- 549  Florida lancelet
EPB71550   565 p---aeaeeiLDKVTAEKGGAVLRMLRAv----------vGDETFQEGVKNFLTTHAngt--anYTEFWDALDNAvglkl 629  Ancylostoma ceyl...
ESW97509   411 a---dtiqstFSKHSYDKGIFVLRMLAGlfne----tpceNYDNFFSAVGDFINKNKygl--fkPTDLWIFLKDHtlnk- 480  Ogataea parapoly...
CDJ96941   649 p---sgvtlmSDEITNDKGAALLRMLNAi----------iGEEKFQRGVQDFLKAHHdhsvnteKENLFDAWNNVvldlk 715  barber pole worm
ODV85285   418 a---dkiqntFSRHSYEKGIFVLRMLGNlfnddd-dtkedNYDQFFKIIGDFIETNKygl--fkPIDLWNFMKNHelnk- 490  Candida arabinof...
Feature 1                         
1Z1W_A     401 -------kPVKRVMEYWIK 412  Thermoplasma acidophilum
EFX87928   514 t--isgrmSVARIMKTWTQ 530  common water flea
JAN42033   549 t--lsprkHVGRIMKTWTE 565  Daphnia magna
CDK26009   436 -------fDVPTMVNSWVR 447  Kuraishia capsulata CBS 1993
ODQ45220   478 -----fgyDIPTIMNSWIR 491  Pichia membranifaciens NRRL Y-2026
EEN44873   550 ------riDVAAFMEPWVT 562  Florida lancelet
EPB71550   630 nawdgnkfKTADFAEKWIL 648  Ancylostoma ceylanicum
ESW97509   481 -----fkyDIPTIMFSWTR 494  Ogataea parapolymorpha DL-1
CDJ96941   716 s-wdgeklNVGDFIDKWIK 733  barber pole worm
ODV85285   491 -----fgyDIPTIMNSWIR 504  Candida arabinofermentans NRRL YB-2248

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