1KA6,1D4T,1I3Z


Conserved Protein Domain Family
SH2_SAP1

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cd10342: SH2_SAP1 
Click on image for an interactive view with Cn3D
Src homology 2 (SH2) domain found in SLAM-associated protein (SAP)1
The X-linked lymphoproliferative syndrome (XLP) gene encodes SAP (also called SH2D1A/DSHP) a protein that consists of a 5 residue N-terminus, a single SH2 domain, and a short 25 residue C-terminal tail. XLP is characterized by an extreme sensitivity to Epstein-Barr virus. Both T and natural killer (NK) cell dysfunctions have been seen in XLP patients. SAP binds the cytoplasmic tail of Signaling lymphocytic activation molecule (SLAM), 2B4, Ly-9, and CD84. SAP is believed to function as a signaling inhibitor, by blocking or regulating binding of other signaling proteins. SAP and the SAP-like protein EAT-2 recognize the sequence motif TIpYXX[VI], which is found in the cytoplasmic domains of a restricted number of T, B, and NK cell surface receptors and are proposed to be natural inhibitors or regulators of the physiological role of a small family of receptors on the surface of these cells. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Statistics
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PSSM-Id: 198205
Aligned: 3 rows
Threshold Bit Score: 84.6902
Created: 23-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
phosphotyrosinehydrophobic
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1:phosphotyrosine binding pocket [polypeptide binding site]
Evidence:
  • Structure:1D4T: Human Xlp protein SAP SH2 domain binds the SLAM peptide, contacts at 4A
  • Structure:1I3Z: Mouse Eat2 SH2 domain binds the SLAM phosphopeptide
  • Comment:conserved Arg forms critical H-bonds with phosphate oxygens of pTyr side chain
  • Citation:PMID 9817027
  • Citation:PMID 8181064
  • Citation:PMID 8604142
  • Citation:PMID 7521735

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                #                  #                      #                          
1KA6_A      2 DAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETApGVHKRYFRKIk 81  human
1D4T_A      2 DAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETApGVHKRYFRKIk 81  human
1I3Z_A      1 MDLPYYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDaHTPRTIFPNLq 80  house mouse
Feature 1                            
1KA6_A     82 NLISAFQKPDQGIVIPLQYPVEK 104 human
1D4T_A     82 NLISAFQKPDQGIVIPLQYPVEK 104 human
1I3Z_A     81 ELVSKYGKPGQGLVVHLSNPIMR 103 house mouse

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