Conserved Protein Domain Family
SNC1

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COG5143: SNC1 
Synaptobrevin/VAMP-like protein [Intracellular trafficking and secretion]
Statistics
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PSSM-Id: 227472
Aligned: 10 rows
Threshold Bit Score: 114.448
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
9755337   18 ISSCFQPFQKNENYGTITSANEQITPVIFHNLIMDMVLPKVVPIKGNkvtkmsMNLIDGFDCFYSTDDHDPKTVYVCFTL 97  baker's yeast
19173013   1 MAIISLVVINVHTRKVKAKAFSLGQFSFFTRGKVRETLMFISKELAE--------KLETYEFQEYTHEFN--DKKTYRLF 70  Encephalitozoon cun...
19074898   1 MAILYTQIVKLPDHRILSGEYSPQSNSLRPGNDIVKELRDTIKSIPSggttsfYTFNSSDTRFVFYFKMGSGIVFAVISD 80  Encephalitozoon cun...
2842701    1 --------------------------------------------------------------------MS--EPYDPYIP 10  fission yeast
19113353   3 LYSVSILRFDPKPVQLLCTASDLSSFSFFQRSSIGEFMNFFTKTVAErtnpgqRQDVEQSNYVFHVYNRSDGLCGVIASD 82  fission yeast
19113010   2 LK---LFR---LPLAASVDDESTERNLESHKKQAKLILKRLSPTSEK------RASIESGDYTFHYLIDN-GICYLCICE 68  fission yeast
401107     1 --------------------------------------------------------------------MSSSTPFDPYAL 12  baker's yeast
549743     3 IYYIGVFRSGGEKALELSEVKDLSQFGFFERSSVGQFMTFFAETVASrtgagqRQSIEEGNYIGHVYARSEGICGVLITD 82  baker's yeast
134542     2 IKSTLIYREDGLPLCTSVDNE-NDPSLFEQKQKVKIVVSRLTPQSAT------EATLESGSFEIHYLKKS-MVYYFVICE 73  baker's yeast
1711414    1 --------------------------------------------------------------------MSSSVPYDPYVP 12  baker's yeast
9755337   98 VDMPKILPIrilsglQEYESNATNELLSSHVGQILDSFHEelvEYRNQTLNSSGNgqsSngNGQNTISDI-GDATEDQIK 176 baker's yeast
19173013  71 SLVHNDLAY------IACADDDYP--GIVALKLLQEARHG-------DIEKLIEE------YKDPASKHT-LLQIQNEVE 128 Encephalitozoon cun...
19074898  81 KYTSSKLAS------GYMDQVV-----ESFMKIYTDNPKT----TYYTFDPTIKM------LSDRFNRDSnYAQGMAVVE 139 Encephalitozoon cun...
2842701   11 AEPSAAVRS------GNAAASSTPNMKTAAIQQQIDDTVG---IMRENISKVSER---G--ERLDSLQDK-TDNLAVSAQ 75  fission yeast
19113353  83 KEYPLRVAY------TLLNKILDEFLTKNPRTKWESGAVT---LSFPELDTYLSK------YQDPKQADT-IMRVQQELD 146 fission yeast
19113010  69 QSYPRKLAF------SYLEELAGEFWNSFGEEALQPGLRP---YAFVQFDTFMQKs--KrvYNTPRANDN-LDKLNTELK 136 fission yeast
401107    13 SEHDEERP-------QNVQSKS----RTAELQAEIDDTVG---IMRDNINKVAER---G--ERLTSIEDK-ADNLAVSAQ 72  baker's yeast
549743    83 KEYPVRPAY------TLLNKILDEYLVAHPKEEWADVTETndaLKMKQLDTYISK------YQDPSQADA-IMKVQQELD 149 baker's yeast
134542    74 SGYPRNLAF------SYLNDIAQEFEHSFANEYPKPTVRP---YQFVNFDNFLQMt--KksYSDKKVQDN-LDQLNQELV 141 baker's yeast
1711414   13 PEESNSG--------ANPNSQN----KTAALRQEIDDTVG---IMRDNINKVAER---G--ERLTSIEDK-ADNLAISAQ 71  baker's yeast
9755337  177 DVIQIMNDNIDKFLERQERVSLLVDKTSQLNSSSNKFRRKAVNIKEIMWWQ 227 baker's yeast
19173013 129 ETKGALSKTLMAVLERNDKLEDLVAKSEHLCYETKLLFKSAKKKNRCC--- 176 Encephalitozoon cuniculi
19074898 140 ETKGLLAESLNMIIKRDENINNLKGLASRMTVEAQMMQKNIQRMHLKSMLN 190 Encephalitozoon cuniculi
2842701   76 GFRRGANRVRKKMWWKDMRMRLCIIIGIIILLVVIIVPIATKFHGK----- 121 fission yeast
19113353 147 ETKDVLHKTIESVLARGEKLDDLIQRSDNLSTQSRMFYKSAKKQNSCCIIA 197 fission yeast
19113010 137 DVTRVMTKNIEDLLYRGDSLEKMADLSSDLRYSSAKYKKAARRVNLEALWR 187 fission yeast
401107    73 GFKRGANRVRKAMWYKDLKMKMCLALVIIILLVVIIVPIAVHFSR------ 117 baker's yeast
549743   150 ETKIVLHKTIENVLQRGEKLDNLVDKSESLTASSKMFYKQAKKSNSCCIIM 200 baker's yeast
134542   142 GVKQIMSKNIEDLLYRGDSLDKMSDMSSSLKETSKRYRKSAQKINFDLLIS 192 baker's yeast
1711414   72 GFKRGANRVRKQMWWKDLKMRMCLFLVVIILLVVIIVPIVVHFS------- 115 baker's yeast
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