5LFI


Conserved Protein Domain Family
LciA-like

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cd21059: LciA-like 
lactococcin A immunity protein (LciA) and similar proteins
This family includes pore-forming bacteriocin class IId lactococcin A immunity protein (LciA) and similar proteins. The subclass IId is a linear, one-peptide bacteriocin that shares no sequence similarity to the other class II pediocin-like bacteriocins (class IIa), two-peptide bacteriocins (class IIb) or cyclic bacteriocins (class IIc). However, they all induce membrane leakage and cell death by specifically binding the mannose phosphotransferase system (man-PTS) on their target cells. LciA shares the same 4-helical bundle structure as the pediocin-like immunity proteins but has a shorter C-terminal helix and a different surface potential. Also, it has a flexible C-terminal tail that is important for the functionality of the immunity protein.
Statistics
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PSSM-Id: 411040
Aligned: 204 rows
Threshold Bit Score: 49.4284
Created: 17-Aug-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5LFI_A        25 IEFENELRSMLATAlekdisqEERNALNIAEKALDnseylPKIILNLRKALTPLAinrt-----lnhdLSELYKFIT 96  Lactococcus lactis...
CRK84576      12 QKVLNDIYDLVLDPnt---leQERNVLLSCKNSIEkggnlFFCIRQLQKDLRPFAikle-----lstkVSKYYVEIS 80  Bacillus sp. LF1
WP_018365350  12 DRVLQVVYDLVLNPei---sdEERQILLTFKNHLEagkdfDKELCYLSENLRQLSvkrlsqkqalspaVRDFYKNFI 85  Streptococcus caballi
WP_036132237  11 EKILNDIYDIVLDAdt---leYERNMFLHYKNAIEngsyvLNCISQLLSELRPYAikqe-----lspkVAKFYVESS 79  Listeria sp. SHR_N...
AFT80934      11 QLLLNEAYDLILNPkt---leKERIALLSFKNAIEsgknfESALMHLVKTVKELAvsqldhrsklspaVNKFYIAIA 84  Leuconostoc carnos...
SDB41636      24 DAVMVDCYNLLLNPdi---kdEERELLLHFKQEIEnkhdfSRTAYRLNRDLQRLSlkylqdkkglsqpVRAFYDSLN 97  Streptococcus henryi
WP_135124594  10 VDLLSVLYELVQDPtv---iePVRQILRHGKNALEngqfdRHVIKQLKDALRIFAlkge-----lnttVTTFLTEIS 78  Granulicatella sp....
WP_125571982  13 ADILALITDYVQEPtl---tdRERTIGQMAKVELEkkhysVRVIQRVLVSLQREAirers----ltpaADTFYHKLS 82  Lactobacillus song...
ARE27329      33 QEFLEILYNYALNPni---kdRERKIVQLGRKELEnkvysLSVANRMVASFQREAissr-----lskdTSVLYNSLF 101 Lactococcus lactis...
WP_024624759  11 AAVLAQLMTYVDADgl---tdRERKIGELAMADIQknvynVKVVNRVMISLQQEAlvtk-----lspaAADFYETMN 79  Lactobacillus fabi...
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