Conserved Protein Domain Family
MFS_spinster_like

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cd17328: MFS_spinster_like 
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters
The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
Statistics
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PSSM-Id: 340886
Aligned: 42 rows
Threshold Bit Score: 191.295
Created: 29-Jul-2008
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative chemical substrate binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of MFS transporters with bound substrates, substrate analogs, and/or inhibitors
  • Comment:since MFS proteins facilitate the transport of many different substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides, the residues involved in substrate binding may not be strictly conserved among superfamily members
  • Comment:the substrate binding site or translocation pore has access to both sides of the membrane in an alternating fashion through a conformational change of the MFS transporter

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               ##  ##  #                                #                            
Q9H2V7     62 VAVLCYINLLNYMDRFTVAGVLPDIEqf-fnIGDSSSGLIQTVFISSYMVLAPVFGYLGDRynRKYLMCGGIAFWSLVTL 140 human
NP_421288  23 LWVLLIIYTLNFLDRQVVNILAEPIKrdlglADWQLGMMTGLAFAIFYTVLGIPIARMAETknRPYIIGISVAVWSAFTV 102 Caulobacter vibrio...
A0QYL8     25 VGVLALVGTLNYVDRFLPSVLAEPIKhdlelSDTAIGVINGFGFLIVYAVMGIAVARVADRgaFGAVVAGCLTLWGTMTM 104 Mycobacterium smeg...
NP_253343  18 VAILMVAYVLSFIDRQILNLLVGPIRrdlaiSDTEMSLLMGLSFALFYTLCGIPLGRMADNrsRRGLILFGVLVWSAMTA 97  Pseudomonas
NP_572347  67 QCSAVMNETSCYALDFNGTGYCEWNYn---gLGIDYQILAGPTFILIFTIAGVFMGFAADKynRVNMLTVCTVIFGIAMI 143 fruit fly
NP_771563  26 LGLLTVIYALNFLDRTIFNVLIEPIKkefalSDTMMGLLAGFGFALFYSLLGIPIARAADRlnRRNIVAVAFAFWSAMTA 105 Bradyrhizobium
NP_421289  45 LGLLLATYTFNFIDRTIISTIGQAIKvdlklTDTQLGLLGGLYFALLYTILGIPIARLAERfnRVTIISVSLVIWSGFTA 124 Caulobacter vibrio...
NP_420626  52 LGLLMLIYALNMLDRQIITILAEPMKaelnlADWQIGAVSGLAFALFYSAVGLPMARFADRgdRVRLIAISLAVWSAFTA 131 Caulobacter vibrio...
NP_195397  45 LILINLAAIMERADENLLPSVYKEVSea-fnAGPSDLGYLTFVRNFVQGLASPLAGVLVITydRPIVLAIGTFCWALSTA 123 thale cress
NP_196581   8 LVLVYLAGIMERADESLLPGVYKEVGda-lhVDPTALGTLTLFRSIVQSSCYPLAAYLSSRhnRAHVIALGAFLWATATF 86  thale cress
Feature 1                            ## ###  #                   #  ##  #                     
Q9H2V7    141 GSSfipgehfWLLLLTRGLVGVGEASYSTIAPTLIADLfvadqrsrMLSIFYFAIPVGSGLGYIAGSKVkdm-------- 212 human
NP_421288 103 VCGfaq--nfWQLILARIGVGVGEAGCTPPAHSLISDYvpkekrasAIAFYSIGTPLGTLAGMAMGGLVada-------- 172 Caulobacter vibrio...
A0QYL8    105 LGGavq--sgFQLALTRVGVAIGEAGSTPAAHAYVARNfvpqrrsaPLAVITIAIPLASTASLLGGGLLaqs-------- 174 Mycobacterium smeg...
NP_253343  98 ACGlar--syWQFLTFRVGVGVGEAALSPAAYSLIADSfprerratAISVYSMGIYLGSGLAFLLGGLVikfasaqgdvh 175 Pseudomonas
NP_572347 144 LQGtvk--eyWQLVILRMIMAAGESGCNPLATGIMSDIfpedkralVMAIFNWGIYGGYGIAFPVGRYItklnf------ 215 fruit fly
NP_771563 106 LCGaas--svTSLALARIGVGIGESAGSPVSQSIVADLfaknerprALGIYAIGTYLGVFLGYFVGGYVnqh-------- 175 Bradyrhizobium
NP_421289 125 LCGaaa--nfAQLALFRFGVGVGEAGCSPPSHSLISDYyepkkratALSIYSFGIPLGTMFGAVAGGWLaqe-------- 194 Caulobacter vibrio...
NP_420626 132 VCGlar--tfPQLILARIGVGIGEAGCTPAAHSLITEFtpraklasALAFYSLGIPLGSLLGLAVGGLLvda-------- 201 Caulobacter vibrio...
NP_195397 124 AVGass--yfIQVALWRAVNGFGLAIVIPALQSFIADSykdgargaGFGMLNLIGTIGGIGGGVVATVMagsef------ 195 thale cress
NP_196581  87 LVAvst--tfFQVAVSRGLNGIGLAIVTPAIQSLVADStddynrgmAFGWLGFTSNIGSILGYVCSILFasksf------ 158 thale cress
Feature 1                                                                                     
Q9H2V7    213 ------agdWHWALRVTPGLGVVAVLLLFLVVrepprgaverhsdlp----------------plnptswwadlralaRN 270 human
NP_421288 173 -------ygWRVAFMVAGAPGLLFALIAAFTLveprkklaaemaara-----------------stqisfaaalavlaTK 228 Caulobacter vibrio...
A0QYL8    175 -------lgWRTAFVIMGAVSVVLAPLVLLVVgvrqslpaapav----------------------vdktaggwwnllRK 225 Mycobacterium smeg...
NP_253343 176 lplfgevrpWQLIFLILGAAGVLFCLLLLAIReparrgvgagva----------------------vplgevgaylraNR 233 Pseudomonas
NP_572347 216 -----wnlgWRVCYLGAGVLTVIMAALTGTTLreperkaigegdrq-------------------tssgkpvslwqviKN 271 fruit fly
NP_771563 176 -------ygWRMAFYVAGLPGILLAAILWLTIsepkrgamqesfv---------------------peplgptlrflaSQ 227 Bradyrhizobium
NP_421289 195 -------fsWRVAFVIVGLPGILLAVIVKLVVkepprghseiverpleaedvvvepakpafsmanefkelwavtkilfGK 267 Caulobacter vibrio...
NP_420626 202 -------mgWRAAFIIAGLPGIGVAVIASLTLreprrlrpkaerap------------------gqttslaaalaelkQK 256 Caulobacter vibrio...
NP_195397 196 ----wgipgWRCAFIMMAALSAVIGLLVFLFVvdprkniereelmahkm------------nsnsvwndslaaaksvvKV 259 thale cress
NP_196581 159 ----ngvagWRIAFLLVAVVSVIVGILVRLFAtdphysdrkitkhvkdk------------pfwsdirdllkeakmviKI 222 thale cress
Feature 1              #  ##  ###  #                                        #   #             
Q9H2V7    271 PSFVLSSLGFTAVAFVTGSLALWAPafllrsrvvlgetppclpgdscsssdsLIFGLITCLTGVLGVGLGVEISRRlrh- 349 human
NP_421288 229 KTFWLVALAASIKAFIGYGYAPFIAsfffrvhgpeiaqlagtfglksagflgLALGLINGTAGVIGAWLGGVLADRlga- 307 Caulobacter vibrio...
A0QYL8    226 PSFLIVVAGTAFISAAGYSLTTFSPaflmrtrg------------mslgevgVEYGLATGAIGVLGLLIVGRLADRlae- 292 Mycobacterium smeg...
NP_253343 234 KTVLCHNFGFACLSFAGYGSGAWVPtffvrthg------------wdaghvgVVYGSIVAVFGCLGIVFGGRLADYwakr 301 Pseudomonas
NP_572347 272 PAMIMLMIAASIRHCGGMTFAYNADlyyntyf--------------pdvdlgWWLFGVTIGIGSVGVVVGGIVSDKivak 337 fruit fly
NP_771563 228 RSFIIVLIGFCLTTYTNYATAAWIPpflarvhh------------lssaeigTYAGTFKGLAGMAGTLLGGFVVAQvsr- 294 Bradyrhizobium
NP_421289 268 WPVLHMVLGVTIASFGAYGSGAFVPsyfvrafd------------lglaqvgLITGLIGGFSAGVGTLVGGFLSDWagk- 334 Caulobacter vibrio...
NP_420626 257 PAFWLIALAAALTSFSYYGQSAFFGsvflrnhgpvltqlgedlglgpaglagLALGLAIGVSAGAGTLIGGKLADRaar- 335 Caulobacter vibrio...
NP_195397 260 STFQIIVAQGIIGSFPWTAMVFFTMwfelig---------------fdhnqtAALLGVFATGGAIGTLMGGIIADKmsri 324 thale cress
NP_196581 223 PSFQIFVAQGVSGSFPWSALAFAPLwleligfs-----------hkttavlvTLFTISCSLGGLFGGYMGDTLAKKfp-- 289 thale cress
Feature 1                                                    ##   #   #                   #  #
Q9H2V7    350 snpRADPLVCATGLLGSAPFLFlslac-------argsiVATYIFIFIGETLLSMNWAIVADIllyvviptrrsTAEAFQ 422 human
NP_421288 308 kdlRAYVTVPAIASVVTIPIFVvams---------ldapMAAIGLLSVNALLATLWYGPVYATaqsivdpalraTASAVL 378 Caulobacter vibrio...
A0QYL8    293 rdpRWLLWIVVTLTLVLLPASVlafv---------vedrMLCVLFLALSYAIGTSYLAPSIAAiqrlvlpeqraTASAMF 363 Mycobacterium smeg...
NP_253343 302 grsDANMRVGLLAAWAVIPFTLvypl---------ldnaNWAAALMAPTVFFLSMPFGVAPAAiqeimpnsmrgQASAIY 372 Pseudomonas
NP_572347 338 mgiRSRAFVLAVSQLIATLPAFgsvy----------fdpLWAMITLGLSYFFAEMWFGIVFAIvveivplrvrsSTIGVF 407 fruit fly
NP_771563 295 gddRWKLWAPAITSGLAGPVFAlcml---------tqdfAMMVAMLALTSFLVGFHLGPIFAIaqtvakpsmraLASALI 365 Bradyrhizobium
NP_421289 335 rsaKWYALTPAIGLILCTPIYIlayl---------qtdwQTTALILLVPGIFHYVYLAPTFGVvqnsveprrraTATALL 405 Caulobacter vibrio...
NP_420626 336 ggvSGYAKQPMVVLLASTPFLGvtpf---------apnlPLALAALAVGVFLHAMAYGPTFASvqvlasprvraTASAIL 406 Caulobacter vibrio...
NP_195397 325 ypnSGRVMCAQFSAFMGIPFSIillkvipqstssysifsITLFLMGLTITWCGSAVNAPMFAEvvpp---rhrtMIYAFD 401 thale cress
NP_196581 290 --nGGRIFLSQVSSGSAIPLAAilliglpddpstafshgLVLVIMGLCISWNGAATNGPIFAEivpe---rartSIYALD 364 thale cress
Feature 1     #  ##  #                                                                        
Q9H2V7    423 IVLSHLLGDAGSPYLiglisdrlrrn----------------------------------wppsflsefraLQFSLMLCA 468 human
NP_421288 379 LLIINLIGLGFGPLIvgllsdila--------------------------------------gpvglgeaqGVRWALIIS 420 Caulobacter vibrio...
A0QYL8    364 LFFNAVFGSVGPFVVgmlsdslt----------------------------------------ddlgaqalGRALLLLVA 403 Mycobacterium smeg...
NP_253343 373 LFVVTLFGLGVGPTAvalvtdf------------------------------------------vfaddmaLRYSLLLVT 410 Pseudomonas
NP_572347 408 LFVMNNIGGNLPILVdpvakilg-----------------------------------------yrgsimiFYAGFYGIS 446 fruit fly
NP_771563 366 ALTATCFGQGVGPLAvgmvndal----------------------------------------kgsygadaVRYSLLSAA 405 Bradyrhizobium
NP_421289 406 FFFLNIIALGVGPVFtgwlidhlaqfhfnnpgggviasvlgsfggeagqsfasacpggiapkgasaelvaqCKTTLSVAS 485 Caulobacter vibrio...
NP_420626 407 FFLTSLIGLGLGPLAvgvasdllr---------------------------------------aslgpvqsLNLACAGAS 447 Caulobacter vibrio...
NP_195397 402 RAFEGSFSSFAAPLVgilseklfgydsrg----------------------------idplkgssvreadaLSKGLLSMM 453 thale cress
NP_196581 365 RSFESILASFAPPIVgmlaqniygykpipeg------------------------stssvkidtdranaasLAKALYTSI 420 thale cress
Feature 1                
Q9H2V7    469 FVGALGGAAFL 479 human
NP_421288 421 ATLGLGAFALF 431 Caulobacter vibrioides
A0QYL8    404 AMQLVGAICYW 414 Mycobacterium smegmatis str. MC2 155
NP_253343 411 LAAVLGAVVLL 421 Pseudomonas
NP_572347 447 SILFFITCFLL 457 fruit fly
NP_771563 406 VTTTLGALLFV 416 Bradyrhizobium
NP_421289 486 QQGIIVSLCFY 496 Caulobacter vibrioides
NP_420626 448 ITMVASVVCFG 458 Caulobacter vibrioides
NP_195397 454 AVPFGLCCLCY 464 thale cress
NP_196581 421 GIPMVICCTIY 431 thale cress

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