Conserved Protein Domain Family
PTZ00138

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PTZ00138: PTZ00138 
small nuclear ribonucleoprotein; Provisional
Statistics
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PSSM-Id: 185472
Aligned: 13 rows
Threshold Bit Score: 141.016
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
126647281  2 NSQTKRKTQKMMLQPINQIFHLFTSKQRVQIWLYDHKNLVLEGVIQGFDEYMNIVLDQASEVYTKKEVrrETSVGQLLLR 81 
71027525   1 MEERKDKLQKIMTQPINQIFRFFTGGTRVQIWLFDQPNTKIEGTIRGFDEYMNMVLDNATEVHVKKNV--KKDVGRILLK 78 
124513718  1 MATTNKKLQKIMTQPINQIFRFFTNKTVVQIWLYDKPDMRIEGIILGFDEYMNMVLDQTKEISVKKNT--KKELGKILLK 78 
85000711   1 MEERKDKLQKIMTQPINQIFRFFTGGTRVQIWLFDQPNTKIEGTIRGFDEYMNMVLDNATEVHVKKNV--KKDVGRILLK 78 
156096492  1 MAATNKKLQKIMTQPINQIFRFFTNKTVVQIWLYDKPDTRIEGKILGFDEYMNMVLDESAEVSLKKNT--RKDLGKILLK 78 
156083891  1 MVGRKDKLQQIMTQPINQIFRFFTSGTRVQIWLYDQPNLKIEGKIRGFDEYMNMVLEDVEELYVKKQE--RRALGTILLK 78 
209882013  1 -MNQQRRTQKIMTQPINQIFRLFTSKQRVQIWLYDHPELSLEGKIQGFDEYMNIVLDDVTEVYTKKDEvsRRDIGRLMLR 79 
145499004  3 HPPYQRKPQKKITQPLHAFFTLFTEKTQLEIWLVENDNLRIQGKLAGFDEYLNLVLDRAVEYDRKTKA--TKELGKILLK 80 
145492122  3 HPPYQRKPQKKITQPLHAFFTLFTEKTQLEIWLVENDNLRIQGKLAGFDEYLNLVLDRAVEYDRKTKA--TKELGKILLK 80 
237844609  4 GVMSNKKLQKIMTQPINLIFRFFTQRMRVQIWLYEQPDMRIEGRIMGFDEYMNMVLDDAEEVYLKKRT--RIPVGRILLK 81 
221058403  1 MAVTNKKLQKIMTQPINQIFRFFTNKTMVQIWLYDKPDTRIEGKILGFDEYMNMVLDESAEVSVKKNT--RKDLGKILLK 78 
294956367  1 -MMSKRKLQKIMTMPINLIFRYLTEKTRIVVWLYDHKDLRMEGVILGFDEYMNVVLDDAEEVNTKKDT--RRPVGRILLK 77 
294952865  1 -MMSKRKLQKIMTMPINLIFRYLTEKTRIVVWLYDHKDLRMEGVILGFDEYMNVVLDDAEEVNTKKDT--RRPVGRILLK 77 
126647281 82 GENISLICECK 92 
71027525  79 GDCMTLISAAT 89 
124513718 79 GDTITLIMEVK 89 
85000711  79 GDCMTLISAAT 89 
156096492 79 GDTITLIMEAK 89 
156083891 79 GDAMALITAAP 89 
209882013 80 GENISLISDAK 90 
145499004 81 GENIVLVRTLE 91 
145492122 81 GENIVLVRTLE 91 
237844609 82 GENVTLIMAT- 91 
221058403 79 GDTITLIMEAK 89 
294956367 78 GDNITLMHAAG 88 
294952865 78 GDNITLMHAVS 88 
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