2EBI


Conserved Protein Domain Family
Myb_DNA-bind_4

?
pfam13837: Myb_DNA-bind_4 
Myb/SANT-like DNA-binding domain
This presumed domain appears to be related to other Myb/SANT-like DNA binding domains. In particular pfam10545 seems most related. This family is greatly expanded in plants and appears in several proteins annotated as transposon proteins.
Statistics
?
PSSM-Id: 463994
Aligned: 122 rows
Threshold Bit Score: 43.0237
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2EBI_A         4 AETWVQDETRSLI-MFR---RG----MDGLFNt------------SKSNKhLWEQISSKMREKGF-DRSPDMCTDKWRNL 62  thale cress
EDW03110      58 TNRVMQADEDFNI-RFV---NLvr-tHRCLYDkkvpe----yrnrDNQEk-AWSLISEDTRESVI------HCKERWRNL 121
XP_001959925  67 SLNWEEAERGLLL-EVI---KSk----VAFVEnrsv-----daksIKAKRlAWSQITKQFNALNFrHRLLEQIQVQWRSM 133
Q16HJ8       333 KPEFARLKVRKNIfPPW---NRi---QTVLLIkihc-----dlrpKFKGYnLFECVSNKLIELHI-NRTPRDCRTRWNNL 400 yellow fever mo...
EEF33741     113 RMKWTDSMVRLLI-MAVfyiGDea-gSEGNNDpstgkk--kagggLSQKKgKWKSVSRAMMEKGF-YVSPQQCEDKFNDL 187
Q9LMN5       116 RVKWTDKMVKLLI-TAV---SYi--gDDSSIdsssrr---kfavlQKKGK--WKSVSKVMAERGY-HVSPQQCEDKFNDL 183 thale cress
Q9C6K4        85 RVKWMDKMVKLMI-TAL---SYi---GEDsgsdk------kfavlQKKGK--WRSVSKVMDERGY-HVSPQQCEDKFNDL 148 thale cress
XP_002266272 116 RVKWTDKMVRLLI-TAV---SYi---GEDAASecgvggrrkyailQKKGK--WKSVSKVMAERGH-YVSPQQCEDKFNDL 185
EES05214      92 RVKWTSGMVKLLV-TAV---SYidedVDADYGtssgrr--khallKRKGK--WRLVSSAMAERGF-AVSPQQCEDKFNDL 162
Q6NZR2       101 GMSWTPAETNALI-AVW---GNer-lVEARYQqlegag--tvfgsKAPGPaMYERVSRALAELGY-ERTPSQCRERIKTL 172 house mouse
2EBI_A        63 LKEFKKAKHHDrGNG-Sa--KMSY-------------------------------YKE 86  thale cress
EDW03110     122 RACLSRYIKQQsGSEpQh--KPYYl------------------------------TEH 147
XP_001959925 134 KNSAKREHQQKhPKS-D---ALEGmr----------------------------mIEF 159
Q16HJ8       401 FRSYKECRSRLrVND-KapvKFEY-------------------------------FDE 426 yellow fever mosquito
EEF33741     188 NKRYKRVNDIL-GKG-T---ACKVvenqslletmdlspk-mkeevkkllnskhlfFRE 239
Q9LMN5       184 NKRYKKLNDMl-GRG-T---SCQVvenpalldsigylndkekddvrkimsskhlfYEE 236 thale cress
Q9C6K4       149 NKRYKKLNEMl-GRG-T---SCEVve----------------------------nPSL 173 thale cress
XP_002266272 186 NKRYKRLNDVl-GRG-T---SCQVvenpalldmmdhltektkedvrkilsskhlfYEE 238
EES05214     163 NKRYKRLTEIl-GRG-R---ACQIve----------------------------kHEL 187
Q6NZR2       173 RRCYSRVKEHGvGKR-K---SSYT-------------------------------FEQ 195 house mouse
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap