Conserved Protein Domain Family
NusA

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COG0195: NusA 
Transcription antitermination factor NusA, contains S1 and KH domains [Transcription]
Statistics
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PSSM-Id: 439965
Aligned: 712 rows
Threshold Bit Score: 205.875
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_661144     26 QSKIFLDKRSESAAVKMDIADLLKEIIQKQLRKDYDPEVESNIFINPERGDFEVYILKKIVKEVDLPTIEIGLDEVRQID 105
WP_010891732  22 EIEFEVLSSIIKEAFEKAYLRTHPGENFETNIDLKQGTINCFRNLVVVENEKVHNEDLETCLDDAVEILLDDARKINANA 101
WP_012514662   1 -----------------------------MVKNIKKLIENVAKEKDIPAKIVEIALKNAIAYGIRKEKHIRGKIYIDFAD 51 
WP_012674817   1 --MPIKLKNVIETVAKEKNIPEEVIERALKDGIFVAVKKEYKLRNDQIKVIYDKDKDELKVLIKKKVTPFVEDEKKEISL 78 
WP_012676807   1 ---MAVKLKNVIEAVAKEKNVPEEIIEKALIDGITAAVKKEYGYKDNVQVIFDKEADELKVLLKKRVTPFVENPKRDISL 77 
WP_009885827  34 LAIIKNVAKTKNLSIEEVVFCLKTALEQAYKKHLNFVNVEVNINFDKGIINVEQLFNVVSDENEDYDDFLEIPLQAANKI 113
NP_109842     13 LQLIKNVAETKNLAIDDVVLCLKTALAQTYKKHLNYVNVEVNIDFNKGLMQIEQLFDVVDDNNEDYDDFLEMPLSEAKKL 92 
WP_023025666   6 QILEALASLESEKSISKEVAIEGIKEGFQKAYERFFDTEAVVKTEINEQTGSINLFQELMVVATDDEIEDDWLEIVLEDA 85 
WP_025208590  19 ELKGITKEEIKKLLEESFQKALNKEYENDLENKEVMLPLFDISINLDEGKISIKRKWILTDKIISEEEINIKKNINDLNL 98 
WP_025734333   3 NGAALLGAINEIAMEKGIAKEVVLIGIKEGFQKAHERFFDTEAKIVVDIDEQAGTLKMFQILEVVEEVEDDWLEISFADA 82 
NP_661144    106 DSLELGDYYEEGPIKLDDYLTRKSIQIIKQSVQKKVRDLERLAVYEECLEKVGEVVAGEVYQVRPNEVIFTYNTSKDHRV 185
WP_010891732 102 QIGDLIKQHISIDNFKSIEVGQIGSLLRQKITEIHNKRVADFWKPSLMKMIRAKVAEVNYNKQRNEITGVKVELDDQWKT 181
WP_012514662  52 DDTITAYIISGREKTKLDISTEDLNRIAAYAAKEEFLKELENAERERGFLEYVSQEGNIVHGIVREITKDQTAIVDLGPI 131
WP_012674817  79 EEAKKYNPNVDYGKFVEVPLDLEDIGRIALSVAKEVIAEKVSRVERDILYKEFKEYEGKIITGTVRRFEGEDIIVDLGRV 158
WP_012676807  78 EEAKKIDPKAEVGSYVFVPLNLEELGRIALNAAKEVITHKVARVEKNILFKEFKELEGKIVTGTVRRFEDGDIIVDLGRI 157
WP_009885827 114 NSSLQLGDVLRKPIPLKNISSDLINKMIAIFNQKISETNFKAVMSEFSSEVGEVIEAKVEDIDTNKEGGLKGYIINLETT 193
NP_109842     93 NPNLEVGGVLRKPVSLKDIKGDLISKMVLLFNQKINETAFKTVMSDFINEVGQVIEARVEDIDTNKDGGLKGYIVNLETT 172
WP_023025666  86 LKINKEAKVGDKVYKPIDFDEEFSRVAVGQVRQIFQQKIRATERAMIYEKFIQLEGEIVRGKIVGMNDQGTSYILDIDGV 165
WP_025208590  99 ENLNVLENLKIDDYYFEDIDLNAIEHDGFFLYVKQLFTQKVSEAEKVKIYEKFIDYKDQIVKAKVEKVALTHYLLSYQDN 178
WP_025734333  83 KKLNNAIQIGETIKKEIHFNEEFSRLAVIQVRQILQQKIKGAERANVYDKFANLEHTILPGKVTGMNEQGNSYLLDINGT 162
NP_661144    186 ELVLPKSEMMKKDNPRRTPRMKLYVKRIEREKvkvrnddgtveeRek---------------pdGGmKVIVSRVDDRFLY 250
WP_010891732 182 LGYLSRKDRIGDEKFKVGETYDFLIKEVKEQS------------R-------------------LW-PILLSRTEPELVE 229
WP_012514662 132 DAELPRREQISKESFKKNDRVKALLFSVQKER------------G-------------------RP-VLLLSRTHPKFLR 179
WP_012674817 159 EAILPKEEQIPKEKYKIGDRVRALVLKVLKEN------------Kypilekgkv--krvikvseGP-LIILSRTHPNFLK 223
WP_012676807 158 EAVLPEEEQIKKEKYRVGDRIRALILKVIKDG------------SypvyergkvkrvikpidrdKP-LVILSRTHPNFLR 224
WP_009885827 194 KGYISKRELSKGERLEIGKKYLFVIKEIQRQA------------S-------------------LW-PITLSRSDTRLLQ 241
NP_109842    173 KGYMPKRELSKGEKLDIGKKYLFVIKEIQKQS------------S-------------------MW-PITLSRSDSRLLE 220
WP_023025666 166 HTSLWNQKTINKEEFVVNELVDVLLEEVAREN------------K-------------------YS-QLVVSRVAPKFLA 213
WP_025208590 179 VIFLSKRETSKLDQFKFGDFVYVYITKIEKSS------------R-------------------DA-QIIASRKNKEFIV 226
WP_025734333 163 QASLWKQKVIPGEKFEVNQIIEVYVEEVAKED------------K-------------------IS-QVKVSRTAPAFLE 210
NP_661144    251 KLFESEVPEILDGLIVIKGIARVPGERAKVAVESTSSRIDPVGATVGYRGKRIQSIVKELNNENIDVIYYTDEPQVFIAR 330
WP_010891732 230 EILKREVVDIKNGNIEIKKIARIAGFKTKVAVSTNLLNIEPVAVVVGNKGLTITSISKQLNNERIDIIRYADDKRIFIAN 309
WP_012514662 180 RLLEAEIPEVATGLVKIISVAREPGEKAKVVVDTEDKKIDPVGVVIGIKGSKINPISKELAGEHIDVVRYSKDKKKFLEN 259
WP_012674817 224 KLLEIEVPEIQEGEIEVKAVAREPGERAKVAVYTKDKNIDPVGVVVGLKGSRIQNVSNELSDEKIDVIEWSEDPARFVIR 303
WP_012676807 225 KLIEIEVPEIQEGEIEIKAIAREPGERAKVAVWTEDKNIDPVGVVVGLKGSRIQNVSAELSGEKIDVIEWDPDPAQFILR 304
WP_009885827 242 FLLTSNTPEIENGTIVIKKIERSPGVKSKIAVISNDPAVDPVAAILGPKGEKIRGISEEFNGEIIDIVFWNEDKLKFLIN 321
NP_109842    221 FLLNSNTPEIANGTIEIKKMERSPGTKSKVAVISKDPVVDPIAAILGPKGERIRGISEEFNGEIIDIVIWNEDKLKFLVN 300
WP_023025666 214 KLVEKEVSEVAQGLVEVMSVSREPGKRAKIAVLSHDEDVEPIGAIVGVKGSRINNISKELRGEKIDVVKWDDEIIPFIIN 293
WP_025208590 227 KLLEKEIEDVADNVIRVEKIARQPGFKTKIIVSSSLEEVDPVGSIIGVKGQKIRPIIDELRGERIDIIEYSKDIDIQIAR 306
WP_025734333 211 KLLEREVPEIRNRLIAIKAISREPGVRAKVAVVSYDDAIDAKGSLIGENSTRIDAVRKALKDERIDVIKWDEDLTKFIME 290
NP_661144    331 ALQPAKIDPMTVh-aDMK-TRKARVMLKPDQIKYAIGKNGNNIHLAEKLTGYE-IDVYRDVIDKSl--E--------DpN 397
WP_010891732 310 AIGLDKLKGLLVq-eNESgQRSAIAIVSKDDLPSVIGRGGANIRLIAKITEWN-IDVKTIEQAFEeniLyekfdekiyrs 387
WP_012514662 260 LFFPAKILDVR-----ES-DNQIEVAVDKDQISLAIGKRGINTKLAYKILGKH-IDVMSKEDFDKl-kKl-------S-- 322
WP_012674817 304 ALSPARPTKYRL---LPK-EKRIEVAVPKEELSLAIGKNGINAKLAHKLTGWH-IDILSEEDFEKi-qKl-------PtK 370
WP_012676807 305 ALSPSHPKKWRL---LED-EKRIEVAVPKNELSLAIGKGGINAKLAHKLTGWH-IDILSEEDFERi-qQl-------PrK 371
WP_009885827 322 AILPAEVIGYNIlqdDER-DTSIEVVVPANQIANVFGFKGVNIRLISNLTGWNsVDVYSEKDASEaniKftrlsfepegl 400
NP_109842    301 AVLPAEVVGYNIlqdDER-DTSIEIVVPANQIANVFGFKGINIRLISNLTGWSsVDVYTEKDAAEqgiEftrvnfqpqgi 379
WP_023025666 294 AMAPVKVISVNE---VEG---EFDIVVPNQQLSLAIGKGGMAAKLVANLLKRR-INIYSLENAITdnmDvlwngniteee 366
WP_025208590 307 AVIPGKIIGTKKv-sDEK----YILVTEEKDFLSVLGKSGLNIKLVANLVDKK-LDVKTKKMADEekvSyhriviptAyQ 380
WP_025734333 291 AMAPVRVISINF---IEG-TEEIDVVVPNEQLSLAIGKKGVAARLVANLIKKR-VNIYSYDDAQKfaiDinwngnitlae 365
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