2IFA,1YWQ,4URP


Conserved Protein Domain Family
Frm2-like

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cd02140: Frm2-like 
Click on image for an interactive view with Cn3D
nitroreductase family protein
A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.
Statistics
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PSSM-Id: 380317
Aligned: 25 rows
Threshold Bit Score: 215.247
Created: 19-Jan-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
FMN bindingdimer interface
Conserved site includes 17 residues -Click on image for an interactive view with Cn3D
Feature 1:FMN binding site [chemical binding site]
Evidence:
  • Structure:2IFA: nitroreductase from Streptococcus mutans dimer binds two molecules of FMN, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            ### #                          #####                                     
2IFA_A      4 FLDLQKQRRSIYALGKTVd--LSKAELVALIQNAIKQAPSAFNSQTSRALVLFGQDSQDFWNk---IAYSELEkvtp--- 75  Streptococcus muta...
CAG60026   17 VLEAIVARRSIHYLKPELpegVTFDDIYHIVQECVKHTPTSFNSQVNRAFIVRGALHYKIWDq---VVNKIKEp------ 87  Candida glabrata C...
EAL18153    7 FFEAVIARRSYYNLTNKTt--LSNAQLQEIIEKSVKYAPTSFNGQQSRAVLVSGSKHNELWDk---ITETHLRtlkgd-- 79  Cryptococcus neofo...
EAA64862    9 WLEAAAYRRSVRALEGTSk--VSDERVHEIVAKVLSFAPSSYNTQPVRISLAFGKKHKELWS----IILREAEpilks-- 80  Aspergillus nidula...
EAL89796   58 LIELAKARRTIYKLGKNSp--VPDSKIEEVVNAAIQHVPSSFNTQSTRLVVLLHAEHERLWE----IVIDTFMqlvq--- 128 Aspergillus fumiga...
EAA64454   12 LLEAVKARRTIYGLKAESp--VSDDTIEAIVRDAVLHVPSSFNTQTSRVVLLLKEEHQKVWD----IALQAMEglvaaga 85  Aspergillus nidula...
CAC18179   11 VLDLIKQRRTYYPLSKDLg-sLTTERINEIVKEALQHVPSSFNSQSNRVVVLLGAEHEKLWD----ITTETLKaivp--- 82  Neurospora crassa
NP_009904   7 YLNAITNRRTIYNLKPELpqgVGLDDVKRTVHVILKNTPTAFNSQVNRAVIIVGDTHKRIWDa---VASAMPTa------ 77  baker's yeast
CAC42959    7 YLKTLTARRTIYALKPELpgeITINDIQSVVQTIIKETPTAFNSQPNRAVILTGETHKKVWDe---VTKAIESpa----- 78  baker's yeast
EAA65018   50 LVELAKARRTVYQLGSNSp--VPDSEIEKLVHAAILNVPSAFNTQSTRLLVLLHREHERLWDvaieVFKNLLNt------ 121 Aspergillus nidula...
Feature 1                                                                 #  #   #     #      
2IFA_A     76 --aeaFAGTkak-----lesFAAGVGTILLFEDQAVVRNLEENFPLYAENFQP-------WSEQAHGIALYAIWLALAEQ 141 Streptococcus muta...
CAG60026   88 ----eYRARpl-------riRDGAYGSIFFYVDENVTERNKVEHPEWAPVCEA-------YADQAMGAASIAAWTVMHNM 149 Candida glabrata C...
EAL18153   80 ksqeeFWANkik------dqYRAGYGTVIFFEDQDIVNGFSAKMPAFAQAFPV-------WSENSAGILQHIVWTALVAE 146 Cryptococcus neofo...
EAA64862   81 -inpdLWQKlgpl----yegHKAAYGSVLFWERGGTTKEAAETHKATEHMFGE-------WGEHTQGIHQILVWTALELE 148 Aspergillus nidula...
EAL89796  129 -sgavPETTwknqtlpklqgMKNGVGTILFYEDPAHIKPFSEKFATYKDYFQP-------WAEHSNAMHQYFRGKQSGQP 200 Aspergillus fumiga...
EAA64454   86 lpkeaFESStkpk----legFRAGYGTVLFFVDYDALKDIKEKFAIYADKFDPfalesnaMSQYLGMHQSAGIWTALASE 161 Aspergillus nidula...
CAC18179   83 --edsFASTagk-----mamFKGAAGTILFFEDETVVKGMQEQFAVYADRFPV-------WAVQSDAMLQHTLWVALEAE 148 Neurospora crassa
NP_009904  78 ----eAKKRpe-------scRDEAYGSVIFFTDEGPTEKLQRDFPALAAAFPT-------CAAHTTGAVQIQSWTALELL 139 baker's yeast
CAC42959   79 ---gqKRPAs---------aRDEAFGSVIFFTDDKVTEKLKADFPAYAAAFPS-------FADHTSGAAQINSWVALEAM 139 baker's yeast
EAA65018  122 -----GAIPke--------vWERQTLPKLQGFRAGVGTPWAEHSNAMHQFFRAs------DPRLPTFGPILCFWTGLESL 182 Aspergillus nidula...
Feature 1           ###                                            #          
2IFA_A    142 -NIGXSVQHYNPlvDAQVAEKYDLPt-----nWKXRAQIPFGSIEAP---AGEKEFXADQERFK 196 Streptococcus mutans UA159
CAG60026  150 -GIGCNMQHYGKymHDPNVLPEDIPs-----hWTMKCQLVFGVPDKD---PNEKKFIENIVKVY 204 Candida glabrata CBS138
EAL18153  147 -GHGASLQHYAQysAETQAAITELVdvs--pnWKVTGLLPFGIPSGPp--GKEKVYEPIEKRTK 205 Cryptococcus neoformans var. neofo...
EAA64862  149 -GVGANLQHMNAipPIEMAIKKFAGvp---ddYKLKAHLNYGDEQGSrpeSPPKLPITETLTIL 208 Aspergillus nidulans FGSC A4
EAL89796  201 sSPSVSAQTSNTttPSSTPPSPNNGtsprsgaSSRNSSSVAGRANQA---RRPRSPLKSGLRSS 261 Aspergillus fumigatus Af293
EAA64454  162 -GFGANLQHYSPliDEQIAKQWNIPa-----nWKLDAQLVFGTPTSG---PLEKTFAPIEDRFK 216 Aspergillus nidulans FGSC A4
CAC18179  149 -GLGANLQHYNPliDAKVAETWSIPe-----sWKLNAQLVFGGKTGD---AGEKAFGPVEEKFK 203 Neurospora crassa
NP_009904 140 -GLGANLQHYNDyvKSALPQDVPIA-------WTVQSQLVFGVPTAL---PEEKTFINNVINVY 192 baker's yeast
CAC42959  140 -GLGGHLQHYNGyiKAALPSKIPES-------WTVQAQLVFGTPAAP---PGEKTYIKNDVEIF 192 baker's yeast
EAA65018  183 -GFAANLQHYNPliDGPVAKQWDIPs-----eWKLVAQLVFGSPKGV---PGEKSQKPIEDRVK 237 Aspergillus nidulans FGSC A4

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