Conserved Protein Domain Family
RSC8

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COG5259: RSC8 
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription]
Statistics
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PSSM-Id: 227584
Aligned: 5 rows
Threshold Bit Score: 556.422
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
417834   253 KTESVDKKVDSGEERNEQEREIMn--DHSKSANPKKTTITRVEPETFEIPQAHEIVIPSYSKWFNLEKIHSIEVQSLPEF 330 baker's yeast
19173572   1 ------------------------------------------------MENIFPLQESVEIEEIYGSKRPNANPPKGPRA 32  Encephalitozoon cun...
19115169   1 MSNVTENKHDLHENGVPDSAQPm---ELDVSKKEDTEPEVRDEAKEFLLSQLPQVEVPEWAQWFDFSKVHEIEKKQNPEF 77  fission yeast
19114712   1 -------------------------------------MTLDQVRIPFLVEQTYPIIVPSYAGWFDMSKIHDIERRSNPEF 43  fission yeast
1176014   26 STNTPSFPHLAQEQAKEESATLGaevAHKKINYEQEAQKLEEKALRFLAKQTHPVIIPSFASWFDISKIHEIEKRSNPDF 105 baker's yeast
417834   331 FTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNVSGDAAALFRLHKFLTKWGLINYQVDSKLLPKNIEPPLTS 410 baker's yeast
19173572  33 FKMRSGVCSFTDVETYQVKSPGWFRKGDLSALELVSMNR-----VILGVGKERYMQTRDRIVSGYEDGCRPMTIGKALML 107 Encephalitozoon cun...
19115169  78 FDGKNTSKTPEVYKEYRDFMISTFRLNSKVYLTFTACRRNLAGDVCAVLRVHRFLEQWGLINYNVNPDTRPSKIGPPSTS 157 fission yeast
19114712  44 FNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVTACRRNLVGDVCAIIRVHAFLEQWGLINYQIDPETRPAFRLPPISG 123 fission yeast
1176014  106 FNDSSRFKTPKAYKDTRNFIINTYRLSPYEYLTITAVRRNVAMDVASIVKIHAFLEKWGLINYQIDPRTKPSLIGPSFTG 185 baker's yeast
417834   411 QYSTRHDAPRGLFPFESYKPSVQLPDMAKLKK--MMNTSDSESTLYKYLKE-SKRKYDEITHPPS------------TTD 475 baker's yeast
19173572 108 TDMDLHSLLEVFSFVERWGLINHRSLLEKEIRyfETHKGENTSPPEESPKKeGQGKVVDLKEHLEk-----------SSC 176 Encephalitozoon cun...
19115169 158 HFQILADTPRGLVPLLPPPSSSIPRSKAVTIEdpSIVRTNIYDPSLDDVLKgKGSTPNQKPSLSNlhennidqsdspQHC 237 fission yeast
19114712 124 HVQAISNTPIVTQEMLAQHPPPSTVGGSSSQEf-VKLEEKHYSPSLNAMEQtSPKEEDEKSDKVPrv---------dKVC 193 fission yeast
1176014  186 HFQVVLDTPQGLKPFLPENVIKQEVEGGDGAEp-QVKKEFPVNLTIKKNVYdSAQDFNALQDESRnsrq----ihkvYIC 260 baker's yeast
417834   476 DENGDKNDNGGKMNN--EVSTSTSMTGDANLLEEGETSRPLKKVKILEQ---IDENWSKEDLQKLLKGIQEFGADWYKVA 550 baker's yeast
19173572 177 SCGGRASFFTRSLVLr------CAECIDNGVYPQESLKSDFFPATESLL---RN-MWSRKEEFLLLEGINRFGDEWDSVS 246 Encephalitozoon cun...
19115169 238 YCCGNKFNESYYQSQtaQKYNVCISCYQQNRFPSPTTIADYKEVAIQNKi-eDDDTWTAQELVLLSEGVEMYSDDWAKVA 316 fission yeast
19114712 194 FTCGVNCSQTWYHNLknKKYDICPNCYKQGRFSSSFNSSDFLCMDAIDFnhdEEKPWSNQETLLLLEAIETYGDDWNQIA 273 fission yeast
1176014  261 HTCGNESINVRYHNLraRDTNLCSRCFQEGHFGANFQSSDFIRLENNGNs--VKKNWSDQEMLLLLEGIEMYEDQWEKIA 338 baker's yeast
417834   551 KNVG-NKSPEQCILRFLQLPIEDKFLYGDGNgKGDNDNGLgplkyaphLPFSKSENPVLSTIAFLVGLVNPKtVQSMTQR 629 baker's yeast
19173572 247 RHVQ-TKTKEQCIFHFLRLPTLENTLSKGDF-----SIGR---------LFETADNPVMCLIVLICGIVHPR-VASECAR 310 Encephalitozoon cun...
19115169 317 SHVN-TKSVEECILKFLNLPSSDKALFKMDK--VHTNPVV--------DSLQGK-NPILSVVSFLAKMVPPS-SFTQKSS 383 fission yeast
19114712 274 LHVG-SRTKEQCLIHFLQIPIEDPYRQKLQGdFSPFKKGF--------LPFDENENPVLSTLTYLASIVQQG-MKERKQN 343 fission yeast
1176014  339 DHVGgHKRVEDCIEKFLSLPIEDNYIREVVG-STLNGKGG--------DSRDGS-----VSGSKLMECVNDA-VQTLLQG 403 baker's yeast
417834   630 AIqsaesIKSQKEEISDQKPIEHIKEGSEIAISSLGYRSHIFATNEERQMNFLTNELIRLQMEKLDAKLNHLKKLEKFME 709 baker's yeast
19173572 311 T----------AIKHINRCSQ---DMVIQYILDAGKEKAGEQRDLEKRKIERLRNVMCEALLNKIKMKIGTYKELYLSTQ 377 Encephalitozoon cun...
19115169 384 AKeeesdKVKGESVYPKPESESYDVEMNGKSLEDSDSLSELYLTNEEKKMASIIKDSVNVQIKLIESKLSHFDYLDQHIR 463 fission yeast
19114712 344 ES-----VKQGETSFGNSEFKNPLERVAYYALKSAAQKAKLIAAFENRQLRRLVFSLIQAQLEKLQLKMKVLEQLEKMCS 418 fission yeast
1176014  404 D------DKLGKVSDKSREIS---EKYIEESQAIIQELVKLTMEKLESKFTKLCDLETQLEMEKLKYVKESEKMLNDRLS 474 baker's yeast
417834   710 LERKTLERqqeNLLIQRLNFNQNSSKIVNVLSKCLNLISDSNinnssvaekeeirsqidhfksmlskpetlsiGKNPFNK 789 baker's yeast
19173572 378 RVRNELVA------LRRSLAEEINFAGDE--------------------------------------------------- 400 Encephalitozoon cun...
19115169 464 LKSQELDA------FAQATYREKLYMKRECQNARKKIEQQLQ-------------------------------------- 499 fission yeast
19114712 419 LELSELDLrgkNLLLSRLSTKKMLLAFNKKLEEAVNLGGEDG-------------------------------LKIIDDL 467 fission yeast
1176014  475 LSKQILDL---NKSLEELNVSKKLVLISEQVDSGIQLVEKDQe------------------------------GDDEDGN 521 baker's yeast
417834   790 PNIETGENHNGQSISNENDVKPISIEAPQFYRYWSA 825 baker's yeast
19173572     ------------------------------------     Encephalitozoon cuniculi
19115169 500 -SKDTAANGLPVQSSAETSVIPASSMSPS------- 527 fission yeast
19114712 468 MSTEHAEALLTFEMPTATTVSPLSKQYPDKFRTIAL 503 fission yeast
1176014  522 TATGHGVKRVGKEGEEVGEGDSIAKLQPQVYKPWSL 557 baker's yeast
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